RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ZNF541Q9H0D2 1346 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 ADCY10Q96PN6 1610 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 CPS1P31327 1500 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 TEX13DA0A0J9YY54 714 aaPredicted RBP7.04□□□□□ -1.28
UPF2-203ENST00000397053 hCG_1807616A0A1W2PRN6 198 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 hCG_2039718K7EN88 272 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
UPF2-203ENST00000397053 SLC7A4O43246 635 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 GSTT2BP0CG30 244 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 TPSB2P20231 275 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 RPL5P46777 297 aaKnown RBP7.04□□□□□ -1.28
UPF2-203ENST00000397053 SCN1BQ07699 218 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 TPSAB1Q15661 275 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 MTX3Q5HYI7 312 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 SLC39A4Q6P5W5 647 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 TTLL10Q6ZVT0 673 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 ASB18Q6ZVZ8 466 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 LINGO2Q7L985 606 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 ZNF100Q8IYN0 542 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 NLGN2Q8NFZ4 835 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 OR2L2Q8NH16 312 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 SLC13A3Q8WWT9 602 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 SCGB3A2Q96PL1 93 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 RNPEPL1Q9HAU8 725 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 PARPBPQ9NWS1 579 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 TAS2R7Q9NYW3 318 aa7.04□□□□□ -1.28
UPF2-203ENST00000397053 RSL24D1Q9UHA3 163 aaKnown RBP7.04□□□□□ -1.28
UPF2-203ENST00000397053 K7EPI3 171 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MAN2B1O00754 1011 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 SNX3O60493 162 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 RPP14O95059 124 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 BPGMP07738 259 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 NELFEP18615 380 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 MSX1P28360 303 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CAV3P56539 151 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 ARPC4P59998 168 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 HERV-K104P61576 105 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 NT5DC1Q5TFE4 455 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 PLD5Q8N7P1 536 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 GSTCDQ8NEC7 633 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 OR5T2Q8NGG2 359 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 OR10A6Q8NH74 314 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 TM9SF4Q92544 642 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 DGCR14Q96DF8 476 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 FAM83CQ9BQN1 747 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 C14orf105Q9NVL8 296 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 HRASLS2Q9NWW9 162 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 ASB6Q9NWX5 421 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 SPATA7Q9P0W8 599 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CACNG4Q9UBN1 327 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 A0A1B0GVI7 797 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 C9IYK1 514 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 C9JVG2 144 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MID1O15344 667 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CBFA2T3O75081 653 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CCNE2O96020 404 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CHRNA1P02708 482 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MT-ND1P03886 318 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 SYPP08247 313 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 HOXB9P17482 250 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 PTX3P26022 381 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 SLC15A1P46059 708 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 GJA9P57773 515 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 DMWDQ09019 674 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MAD2L1BPQ15013 274 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 FAM174BQ3ZCQ3 159 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 KLHL22Q53GT1 634 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 PRAMEF17Q5VTA0 474 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 HGSNATQ68CP4 663 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 SLCO6A1Q86UG4 719 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 KBTBD6Q86V97 674 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 XYLT1Q86Y38 959 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 PLCZ1Q86YW0 608 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 NXPE1Q8N323 547 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 BOLLQ8N9W6 283 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 MAPK15Q8TD08 544 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 DNAJC19Q96DA6 116 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 CCDC120Q96HB5 630 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 SH3YL1Q96HL8 342 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 PCDHB18PQ96TA0 734 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 C8orf4Q9NR00 106 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 FTSJ1Q9UET6 329 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 MAU2Q9Y6X3 613 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 FGF18O76093 207 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 TBX18O95935 607 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 ZNF3P17036 446 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MAGEA12P43365 314 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 KLF10Q13118 480 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 IRF5Q13568 498 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 ZNF267Q14586 743 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 KIAA1161Q6NSJ0 714 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 NATD1Q8N6N6 113 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 GLB1L3Q8NCI6 653 aaPredicted RBP7.03□□□□□ -1.28
UPF2-203ENST00000397053 OR4C15Q8NGM1 316 aa7.03□□□□□ -1.28
UPF2-203ENST00000397053 MMABQ96EY8 250 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms