RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PPP1R2P1Q96PQ5 205 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 IRF2BPLQ9H1B7 796 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OSER1Q9NX31 292 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 GPR83Q9NYM4 423 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SMIM30A4D0T7 59 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 A8MX80 341 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SERPINF2P08697 491 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CST5P28325 142 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CDC20Q12834 499 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 MED22Q15528 200 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 RFX4Q33E94 735 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TBRG1Q3YBR2 411 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CACHD1Q5VU97 1274 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 AGAP6Q5VW22 663 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NEK5Q6P3R8 708 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SUSD1Q6UWL2 747 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 MBOAT1Q6ZNC8 495 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF621Q6ZSS3 439 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NEK10Q6ZWH5 1172 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SCD5Q86SK9 330 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 METTL23Q86XA0 190 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SPATA2LQ8IUW3 424 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CADM2Q8N3J6 435 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NKAPQ8N5F7 415 aaKnown RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 AGAP4Q96P64 663 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CLSTN3Q9BQT9 956 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CDADC1Q9BWV3 514 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ZYG11BQ9C0D3 744 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 POLR1EQ9GZS1 481 aaKnown RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 MMP28Q9H239 520 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TIGARQ9NQ88 270 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 RABL2BQ9UNT1 228 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 A0A0D9SEW6 157 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ISPDA4D126 451 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OR2A25A4D2G3 310 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SAGE2PA6NJ88 616 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 M0QX08 132 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ARNTLO00327 626 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 DSCR3O14972 297 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ULK1O75385 1050 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 DNAJB5O75953 348 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 GLUD1P00367 558 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NPPAP01160 153 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CSF2P04141 144 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NTRK1P04629 796 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 INHAP05111 366 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TNFRSF1BP20333 461 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 S100A3P33764 101 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TBX4P57082 545 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 VLDLRP98155 873 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ZXDBP98169 803 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CD83Q01151 205 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SLC14A1Q13336 389 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CYP27C1Q4G0S4 372 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 FAM209AQ5JX71 171 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 BRMS1LQ5PSV4 323 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 MSANTD2Q6P1R3 559 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ANGPTL8Q6UXH0 198 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CCDC71Q8IV32 467 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 AADATQ8N5Z0 425 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 IL17RDQ8NFM7 739 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OR10T2Q8NGX3 314 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 NAALAD2Q9Y3Q0 740 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 M0R082 166 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 EIF3FO00303 357 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 OR7A17O14581 309 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 HAT1O14929 419 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 CCL5P13501 91 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 CYP2C18P33260 490 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SLC19A1P41440 591 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 TUFMP49411 452 aaKnown RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 MNX1P50219 401 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 BEX3Q00994 111 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SMARCB1Q12824 385 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 CLPPQ16740 277 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RUNDC3AQ59EK9 446 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 ARMCX4Q5H9R4 360 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 FAM171A1Q5VUB5 890 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 MFSD14CQ5VZR4 134 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 FBXL22Q6P050 247 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 KLHDC8BQ8IXV7 354 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 OR7D4Q8NG98 312 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 NPLOC4Q8TAT6 608 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SKA2Q8WVK7 121 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 EGLN2Q96KS0 407 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 TRNT1Q96Q11 434 aaKnown RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 ATP13A1Q9HD20 1204 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 HEBP1Q9NRV9 189 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RAD18Q9NS91 495 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 WWOXQ9NZC7 414 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 GPRC5BQ9NZH0 403 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 KLHL20Q9Y2M5 609 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 ANKRD28O15084 1053 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 NAT2P11245 290 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 IFI30P13284 250 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SLC15A1P46059 708 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms