RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SPRED3Q2MJR0 410 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 PRAMEF14Q5SWL7 426 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 PRAMEF13Q5VWM6 474 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 KANK2Q63ZY3 851 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 KLHL35Q6PF15 583 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SLC23A3Q6PIS1 610 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 CCDC121Q6ZUS5 278 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 ACAD11Q709F0 780 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 RPS27LQ71UM5 84 aaKnown RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 NAGSQ8N159 534 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 OR4F6Q8NGB9 312 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 OR52B6Q8NGF0 335 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 UBE2E3Q969T4 207 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 REPS1Q96D71 796 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SRMSQ9H3Y6 488 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SNX6Q9UNH7 406 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 B4DGG1 531 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 DCTN3O75935 186 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 KIAA0754O94854 1291 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 EML2O95834 649 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 NPPBP16860 134 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 HRH2P25021 359 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 CXCR2P25025 360 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 FASLGP48023 281 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 UBE2IP63279 158 aaKnown RBP13.24□□□□□ -0.29
VAPB-202ENST00000395802 ABATP80404 500 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 TRAF3Q13114 568 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 NAA25Q14CX7 972 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 HIST2H2ACQ16777 129 aaPredicted RBP13.24□□□□□ -0.29
VAPB-202ENST00000395802 ZNF423Q2M1K9 1284 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 ZXDCQ2QGD7 858 aaPredicted RBP13.24□□□□□ -0.29
VAPB-202ENST00000395802 XKR6Q5GH73 641 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 HIST2H2AA3Q6FI13 130 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 C17orf64Q86WR6 236 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 LRRC56Q8IYG6 542 aaPredicted RBP13.24□□□□□ -0.29
VAPB-202ENST00000395802 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 PPFIBP2Q8ND30 876 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 SLC5A11Q8WWX8 675 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 RILPQ96NA2 401 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 MENTQ9BUN1 341 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 EFCAB11Q9BUY7 163 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 UCK1Q9HA47 277 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 CIDEBQ9UHD4 219 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 TRIM33Q9UPN9 1127 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 KNL1Q8NG31 2342 aa13.24□□□□□ -0.29
VAPB-202ENST00000395802 ZW10O43264 779 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ULK1O75385 1050 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CELA2BP08218 269 aaPredicted RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 CASP2P42575 452 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ERVPABLB-1P60509 514 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CHIT1Q13231 466 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 TRIM61Q5EBN2 209 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 EPGNQ6UW88 154 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 RNF165Q6ZSG1 346 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CDYL2Q8N8U2 506 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 SLC37A2Q8TED4 501 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 LRRC37BQ96QE4 947 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 PITHD1Q9GZP4 211 aaPredicted RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 PCDHGA11Q9Y5H2 935 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 DNAJC15Q9Y5T4 150 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CACNA1EQ15878 2313 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 TRBV23OR9-2A0A075B6M9 112 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 A0A1B0GTQ1 180 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 PPP6CO00743 305 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ZNF195O14628 629 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 DIAPH2O60879 1101 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 WFS1O76024 890 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 OR4F21O95013 312 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 FKBP9O95302 570 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CAPN1P07384 714 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 JUPP14923 745 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 INHBCP55103 352 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 GRIK2Q13002 908 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 FASTKQ14296 549 aaKnown RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 GPR18Q14330 331 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 KIR2DS3Q14952 304 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 PDCD2Q16342 344 aaPredicted RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 LACTB2Q53H82 288 aaPredicted RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ATG9BQ674R7 924 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CLEC6AQ6EIG7 209 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 OGFOD3Q6PK18 319 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 TMEM26Q6ZUK4 368 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 MAVSQ7Z434 540 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
VAPB-202ENST00000395802 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 TWIST2Q8WVJ9 160 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms