RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZBTB14O43829 449 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SRPX2O60687 465 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 VPS26AO75436 327 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 PSIP1O75475 530 aaKnown RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 CTSBP07858 339 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 ENO3P13929 434 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SLC1A2P43004 574 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 CLCN7P51798 805 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 GBX1Q14549 363 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SLC9A5Q14940 896 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 FAM214AQ32MH5 1076 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 HSP90AA5PQ58FG0 334 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 FAM69BQ5VUD6 431 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 FCRL6Q6DN72 434 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 UGT3A1Q6NUS8 523 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 KCNMB4Q86W47 210 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 ADAMTS17Q8TE56 1095 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SMPDL3AQ92484 453 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 SLCO2A1Q92959 643 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 PTERQ96BW5 349 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 CAPZA3Q96KX2 299 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 FER1L6-AS2Q96M78 137 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 EPN3Q9H201 632 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 GALPQ9UBC7 116 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 PCYOX1Q9UHG3 505 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
CXCL12-205ENST00000395794 A0A1B0GX78 115 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 ARHGEF33A8MVX0 844 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 MYO1CO00159 1063 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 DSCR3O14972 297 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PRICKLE3O43900 615 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-205ENST00000395794 CCNDBP1O95273 360 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
CXCL12-205ENST00000395794 ERVK-10P10266 1014 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 NR1D1P20393 614 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PSMB5P28074 263 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 VSX2P58304 361 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-205ENST00000395794 DR1Q01658 176 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 CUL1Q13616 776 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 LRRC8EQ6NSJ5 796 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 KLHL7Q8IXQ5 586 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 OR2A1Q8NGT9 310 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 OR2Y1Q8NGV0 311 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 MRPS30Q9NP92 439 aaKnown RBP13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
CXCL12-205ENST00000395794 CUTCQ9NTM9 273 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 DHRS7Q9Y394 339 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 PCDHGB7Q9Y5F8 929 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 KLK4Q9Y5K2 254 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 SAR1BQ9Y6B6 198 aa13.18□□□□□ -0.3
CXCL12-205ENST00000395794 HYKKA2RU49 373 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 A6NL46 340 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 K7EM74 188 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 SMAPO00193 183 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 KLHL41O60662 606 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 KLF7O75840 302 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 HAUS5O94927 633 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 EIF2S1P05198 315 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 MPC1LP0DKB6 136 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 PNLIPRP1P54315 467 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 MPP1Q00013 466 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 DHX9Q08211 1270 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 ATP1A4Q13733 1029 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 FASTKQ14296 549 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 CRYMQ14894 314 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 BBS9Q3SYG4 887 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 WASHC2DQ5SRD0 308 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 ZNF549Q6P9A3 640 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 MRGPREQ86SM8 312 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 ASB11Q8WXH4 323 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 FKBP10Q96AY3 582 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 PKP4Q99569 1192 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 GPR21Q99679 349 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 EBNA1BP2Q99848 306 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 DPH7Q9BTV6 452 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 TAS2R13Q9NYV9 303 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 ANKMY1Q9P2S6 941 aa13.17□□□□□ -0.3
CXCL12-205ENST00000395794 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
CXCL12-205ENST00000395794 A0A0J9YVX5 310 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 PABPN1LA6NDY0 278 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 EIF3FO00303 357 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 CTSVO60911 334 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms