RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SLC34A1Q06495 639 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 CEACAM7Q14002 265 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 RCAN2Q14206 197 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 BLOC1S3Q6QNY0 202 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 MBOAT1Q6ZNC8 495 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 TRIM46Q7Z4K8 759 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 MILR1Q7Z6M3 343 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 SLC22A18ASQ8N1D0 253 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 MFSD2AQ8NA29 543 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 USP7Q93009 1102 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 COX14Q96I36 57 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 LINC00615Q96LM1 132 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-204ENST00000395454 CCM2Q9BSQ5 444 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 ZCCHC2Q9C0B9 1178 aaKnown RBP14.68□□□□□ -0.06
SCAF11-204ENST00000395454 ZIM2Q9NZV7 527 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 GULP1Q9UBP9 304 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 C15orf41Q9Y2V0 281 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 TMEM98Q9Y2Y6 226 aa14.68□□□□□ -0.06
SCAF11-204ENST00000395454 GPR179Q6PRD1 2367 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 TMEM202A6NGA9 273 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 NPIPB8E9PQR5 432 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 LSM1O15116 133 aaKnown RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 GDF5P43026 501 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 PTDSS1P48651 473 aaKnown RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 CSNK1EP49674 416 aaKnown RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 DIO3P55073 304 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 YPEL5P62699 121 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 EMX2Q04743 252 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 PCDH1Q08174 1060 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 NFATC4Q14934 902 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 TCHHL1Q5QJ38 904 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 SYT12Q8IV01 421 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 SLC22A15Q8IZD6 547 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 SFRP1Q8N474 314 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 FBXO15Q8NCQ5 510 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 FAM174AQ8TBP5 190 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 ATOH1Q92858 354 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-204ENST00000395454 FBXL8Q96CD0 374 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 CDRT15Q96T59 188 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 OR2AG1Q9H205 316 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 NDUFAF1Q9Y375 327 aa14.67□□□□□ -0.06
SCAF11-204ENST00000395454 A0A1B0GTW7 788 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 A0A1W2PR77 199 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 H0Y3Z8 333 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 TOR1BO14657 336 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 SORBS2O94875 1100 aaKnown RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 WNT1P04628 370 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 HIST1H2AGP0C0S8 130 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 HIST1H2ADP20671 130 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 KIF19Q2TAC6 998 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 TPRG1LQ5T0D9 272 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ENPP7Q6UWV6 458 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 BEND7Q8N7W2 519 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 DCBLD1Q8N8Z6 715 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 MCOLN3Q8TDD5 553 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ZNF514Q96K75 400 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 HIST1H2AHQ96KK5 128 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 HIST1H2AJQ99878 128 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 GPATCH1Q9BRR8 931 aaKnown RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 H2AFJQ9BTM1 129 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 TRIM39Q9HCM9 518 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 MRPL40Q9NQ50 206 aaKnown RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ASIC5Q9NY37 505 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ATXN10Q9UBB4 475 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 SUSD2Q9UGT4 822 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 MOSPD1Q9UJG1 213 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 CACNA1EQ15878 2313 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 KCNE1BA0A087WTH5 132 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 OR2AG2A6NM03 316 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 TLR4O00206 839 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 MRASO14807 208 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 CAPN3P20807 821 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 KELP23276 732 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 C21orf59P57076 290 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 PSME3P61289 254 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ABRAXAS2Q15018 415 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ATP6AP1LQ52LC2 224 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 XKR5Q6UX68 686 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 RETREG3Q86VR2 466 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 IQCHQ86VS3 1027 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 GALNT13Q8IUC8 556 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 L3MBTL4Q8NA19 623 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 PCYOX1LQ8NBM8 494 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 MAGEB10Q96LZ2 347 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 S100A14Q9HCY8 104 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 SPAG4Q9NPE6 437 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 SUCOQ9UBS9 1254 aaKnown RBP14.66□□□□□ -0.06
SCAF11-204ENST00000395454 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
SCAF11-204ENST00000395454 SERTM1A2A2V5 107 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 DYTNA2CJ06 578 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ARHGEF33A8MVX0 844 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ACOT8O14734 319 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 HOXC4P09017 264 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ME2P23368 584 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 HMOX2P30519 316 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 KIAA1024LP59773 190 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 AP2B1P63010 937 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 FOXM1Q08050 763 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 GTF2H3Q13889 308 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 TEAD4Q15561 434 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms