RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GPR45Q9Y5Y3 372 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 TNRC6BQ9UPQ9 1833 aaKnown RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PI4KAP42356 2102 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 GPR179Q6PRD1 2367 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 TLR4O00206 839 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PEX11AO75192 247 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 CD1EP15812 388 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 EPORP19235 508 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PBLDP30039 288 aaPredicted RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PCDH1Q08174 1060 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 TBL3Q12788 808 aaKnown RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 ART3Q13508 389 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 NFATC4Q14934 902 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 RPS6KA2Q15349 733 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 ZXDCQ2QGD7 858 aaPredicted RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 C6orf136Q5SQH8 315 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 TPRG1LQ5T0D9 272 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 FAM219BQ5XKK7 198 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 DOK6Q6PKX4 331 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 LAYNQ6UX15 382 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 GK5Q6ZS86 529 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 TRIM46Q7Z4K8 759 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 CFAP206Q8IYR0 622 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 DCBLD1Q8N8Z6 715 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 SNX31Q8N9S9 440 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 L3MBTL4Q8NA19 623 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 OR2T11Q8NH01 316 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PPP3R2Q96LZ3 170 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 SERPINI1Q99574 410 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 BRINP2Q9C0B6 783 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 CCDC167Q9P0B6 97 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 SLC7A8Q9UHI5 535 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 VILLO15195 856 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 RGS14O43566 566 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 UGDHO60701 494 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 KRT6AP02538 564 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 KRT6BP04259 564 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 KELP23276 732 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 PDHA2P29803 388 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 HOXD12P35452 270 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 KRT6CP48668 564 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 EMX2Q04743 252 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 TEAD4Q15561 434 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 PDCD4Q53EL6 469 aaKnown RBP18.71■□□□□ 0.59
LMNB1-202ENST00000395354 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.71■□□□□ 0.59
LMNB1-202ENST00000395354 PEAR1Q5VY43 1037 aaPredicted RBP18.71■□□□□ 0.59
LMNB1-202ENST00000395354 ENPP7Q6UWV6 458 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 HACD2Q6Y1H2 254 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 C11orf96Q7Z7L8 435 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 SLC22A18ASQ8N1D0 253 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 LILRA3Q8N6C8 439 aaPredicted RBP18.71■□□□□ 0.59
LMNB1-202ENST00000395354 USP7Q93009 1102 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 ACTR8Q9H981 624 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 GPR27Q9NS67 375 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 FAM8A1Q9UBU6 413 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 RNF11Q9Y3C5 154 aa18.71■□□□□ 0.59
LMNB1-202ENST00000395354 SPTY2D1-AS1A0A0U1RR47 76 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 MANBAO00462 879 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 ULK1O75385 1050 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 C1orf105O95561 183 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 CEACAM5P06731 702 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 HTR6P50406 440 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 C21orf59P57076 290 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 ZNF33BQ06732 778 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 KPNB1Q14974 876 aaKnown RBP18.7■□□□□ 0.58
LMNB1-202ENST00000395354 ABRAXAS2Q15018 415 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 TCHHL1Q5QJ38 904 aaPredicted RBP18.7■□□□□ 0.58
LMNB1-202ENST00000395354 PAOXQ6QHF9 649 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 XKR5Q6UX68 686 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 LRRTM4Q86VH4 590 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 FUNDC1Q8IVP5 155 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 FBXW8Q8N3Y1 598 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 SFRP1Q8N474 314 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 OXR1Q8N573 874 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 WDR92Q96MX6 357 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 RNPEPL1Q9HAU8 725 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 STOX2Q9P2F5 926 aaPredicted RBP18.7■□□□□ 0.58
LMNB1-202ENST00000395354 GIMAP2Q9UG22 337 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 SNX6Q9UNH7 406 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 SLC17A4Q9Y2C5 497 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 CCL27Q9Y4X3 112 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 CACNA1EQ15878 2313 aa18.7■□□□□ 0.58
LMNB1-202ENST00000395354 SERTM1A2A2V5 107 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 LSM1O15116 133 aaKnown RBP18.69■□□□□ 0.58
LMNB1-202ENST00000395354 NRP2O60462 931 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 EPN2O95208 641 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 PCSK2P16519 638 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 MTTPP55157 894 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 MAD2L1Q13257 205 aaPredicted RBP18.69■□□□□ 0.58
LMNB1-202ENST00000395354 DUOXA1Q1HG43 343 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 MMEL1Q495T6 779 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 COQ5Q5HYK3 327 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 LAIR1Q6GTX8 287 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 AGTRAPQ6RW13 159 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 SCIMPQ6UWF3 145 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 UNC5DQ6UXZ4 953 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 RABEPKQ7Z6M1 372 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 AMZ2Q86W34 360 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 ENDOVQ8N8Q3 282 aaKnown RBP18.69■□□□□ 0.58
LMNB1-202ENST00000395354 OR56A3Q8NH54 315 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms