RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 RGS19P49795 217 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 ERVPABLB-1P60509 514 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 FGL2Q14314 439 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 INPP5AQ14642 412 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 ZXDCQ2QGD7 858 aaPredicted RBP6.76□□□□□ -1.33
RTN4-205ENST00000394609 SLC44A4Q53GD3 710 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 SFT2D3Q587I9 215 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TMEM31Q5JXX7 168 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TCHHL1Q5QJ38 904 aaPredicted RBP6.76□□□□□ -1.33
RTN4-205ENST00000394609 TBC1D3GQ6DHY5 549 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TBC1D3CQ6IPX1 549 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 GPRIN3Q6ZVF9 776 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 GOLGA7Q7Z5G4 137 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 KBTBD6Q86V97 674 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 SATL1Q86VE3 508 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 HEATR4Q86WZ0 1026 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 ZNF547Q8IVP9 402 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 DDIASQ8IXT1 998 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 CFAP206Q8IYR0 622 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TBC1D3Q8IZP1 549 aaPredicted RBP6.76□□□□□ -1.33
RTN4-205ENST00000394609 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 CDYL2Q8N8U2 506 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 PDPRQ8NCN5 879 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 FLCNQ8NFG4 579 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TWIST2Q8WVJ9 160 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 FAM3CQ92520 227 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 ATP6V1E2Q96A05 226 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TMEM159Q96B96 161 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 CMTM5Q96DZ9 223 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 C19orf60Q96EN9 201 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 SIPA1Q96FS4 1042 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 FAR2Q96K12 515 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 ASB2Q96Q27 587 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TMEM79Q9BSE2 394 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 C1QTNF3Q9BXJ4 246 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 CD244Q9BZW8 370 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 IPPKQ9H8X2 491 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 MEAF6Q9HAF1 191 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 PARVBQ9HBI1 364 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 NEUROD4Q9HD90 331 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 GIMAP2Q9UG22 337 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 PRPF19Q9UMS4 504 aaKnown RBP6.76□□□□□ -1.33
RTN4-205ENST00000394609 PSMD13Q9UNM6 376 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 TNPO3Q9Y5L0 923 aaKnown RBP6.76□□□□□ -1.33
RTN4-205ENST00000394609 AK5Q9Y6K8 562 aa6.76□□□□□ -1.33
RTN4-205ENST00000394609 A0A1W2PPC1 479 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SH3PXD2BA1X283 911 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GFYI3L273 518 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 QSOX1O00391 747 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 OR7A17O14581 309 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GIPC1O14908 333 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SLC31A1O15431 190 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 LILRB5O75023 590 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TRMUO75648 421 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 POP7O75817 140 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 OR4F21O95013 312 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ESRRBO95718 433 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 BAG2O95816 211 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ANXA5P08758 320 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 PORP16435 677 aaPredicted RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ADPRHP54922 357 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PCBP4P57723 403 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 NUP107P57740 925 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TUBA4AP68366 448 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MRPS21P82921 87 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 CDK3Q00526 305 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TFF2Q03403 129 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 FOLH1Q04609 750 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SGCGQ13326 291 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GTF2H2Q13888 395 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GTF2H3Q13889 308 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PCBP2Q15366 365 aaKnown RBP eCLIP6.75□□□□□ -1.33
RTN4-205ENST00000394609 CCSMST1Q4G0I0 132 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 METTL21CQ5VZV1 264 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 KANK2Q63ZY3 851 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SULT1C3Q6IMI6 304 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GTF2H2CQ6P1K8 395 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 KIAA1324Q6UXG2 1013 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 Q6ZNX1 250 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 Q6ZS52 159 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SNX31Q8N9S9 440 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 OR56A4Q8NGH8 313 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 CEP70Q8NHQ1 597 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 DNASE1L2Q92874 299 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PYCR2Q96C36 320 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MAELQ96JY0 434 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MRGPRX1Q96LB2 322 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 HBEGFQ99075 208 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MYOCQ99972 504 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TRIM54Q9BYV2 358 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ATG10Q9H0Y0 220 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TUBB1Q9H4B7 451 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms