RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 OPTCQ9UBM4 332 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 EIF3LQ9Y262 564 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 SCN3AQ9NY46 2000 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 ABCB7O75027 752 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 HSPA7P48741 367 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 ATN1P54259 1190 aaPredicted RBP7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 TMBIM6P55061 237 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 LRRC26Q2I0M4 334 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 PDCD4Q53EL6 469 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 MACC1Q6ZN28 852 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 HTR3DQ70Z44 454 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 HSD11B1LQ7Z5J1 315 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 CHAC2Q8WUX2 184 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 HOXD1Q9GZZ0 328 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 TLK1Q9UKI8 766 aa7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 RBMX2Q9Y388 322 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-207ENST00000394105 A0A0X1KG70 313 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CBX4O00257 560 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 BTN3A1O00481 513 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LCKP06239 509 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ZNF24P17028 368 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 RPS3P23396 243 aaKnown RBP eCLIP7.49□□□□□ -1.215e-28■■■□□ 15.7
GAPVD1-207ENST00000394105 PRPH2P23942 346 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ALDH3A2P51648 485 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ARPP19P56211 112 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TWF1Q12792 350 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TRIM60Q495X7 471 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 RUNDC3AQ59EK9 446 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SPANXN4Q5MJ08 99 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 PDE12Q6L8Q7 609 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 VASH1Q7L8A9 365 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LPCAT1Q8NF37 534 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 DNASE1L2Q92874 299 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 HS3ST2Q9Y278 367 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LOC730098B7Z3J9 87 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 H3BQ06 376 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 FFAR2O15552 330 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SOD2P04179 222 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 HNRNPCP07910 306 aaKnown RBP eCLIP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CISD3P0C7P0 127 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SDC1P18827 310 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ATP5C1P36542 298 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CARTPTQ16568 116 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CYP20A1Q6UW02 462 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CMTM8Q8IZV2 173 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CPA6Q8N4T0 437 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 KIAA1958Q8N8K9 716 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 EXT2Q93063 718 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 RNF34Q969K3 372 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ITM2CQ9NQX7 267 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 FKBP14Q9NWM8 211 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ZNF490Q9ULM2 529 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TBC1D24Q9ULP9 559 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 OARD1Q9Y530 152 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 A0A096LPI6 279 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CCDC160A6NGH7 325 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 M0R129 80 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SLC16A6O15403 523 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CLOCKO15516 846 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 NDUFS2O75306 463 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 IDO1P14902 403 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 DESP17661 470 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 C21orf33P30042 268 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 EIF2DP41214 584 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ERVK-8P63133 956 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 PON2Q15165 354 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ZMAT1Q5H9K5 638 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TTC33Q6PID6 262 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TP53I13Q8NBR0 393 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ZNF566Q969W8 418 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SLC6A18Q96N87 628 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ZBTB20Q9HC78 741 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SLAMF7Q9NQ25 335 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 PSME2Q9UL46 239 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 INSL5Q9Y5Q6 135 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SHISA7A6NL88 538 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 PDYNP01213 254 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ENO2P09104 434 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 IRS1P35568 1242 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LIMS1P48059 325 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 VEGFBP49765 207 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 EPHA5P54756 1037 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 PCDH1Q08174 1060 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SERPINA9Q86WD7 417 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 LYSMD2Q8IV50 215 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 OR52E4Q8NGH9 312 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 OVCA2Q8WZ82 227 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 SCAMP4Q969E2 229 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 TMEM175Q9BSA9 504 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 ASIC5Q9NY37 505 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 AFF4Q9UHB7 1163 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 MAN2B2Q9Y2E5 1009 aa7.49□□□□□ -1.21
GAPVD1-207ENST00000394105 A0A087WXM4 84 aa7.48□□□□□ -1.21
GAPVD1-207ENST00000394105 PSMD3O43242 534 aa7.48□□□□□ -1.21
GAPVD1-207ENST00000394105 PFDN1O60925 122 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms