RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CHST8Q9H2A9 424 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 PCMTD2Q9NV79 361 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 EURLQ9NYK6 297 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 ZFATQ9P243 1243 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 SLC17A6Q9P2U8 582 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 KLHL20Q9Y2M5 609 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
RFC4-202ENST00000392481 MRPS18BQ9Y676 258 aaKnown RBP11.38□□□□□ -0.59
RFC4-202ENST00000392481 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
RFC4-202ENST00000392481 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 HEATR5BQ9P2D3 2071 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 CREG1O75629 220 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 URI1O94763 535 aaPredicted RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 SLC16A8O95907 504 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 PSMB5P28074 263 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 PTPN4P29074 926 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 GRIA3P42263 894 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 PNLIPRP1P54315 467 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 LY6DQ14210 128 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 FASTKQ14296 549 aaKnown RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 NAA25Q14CX7 972 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 WHAMMP3Q1A5X7 153 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 RHBDD2Q6NTF9 364 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 PAQR3Q6TCH7 311 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 UBE2R2Q712K3 238 aaPredicted RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 GPATCH11Q8N954 259 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 EEF1AKMT1Q8WVE0 214 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SEC14L1Q92503 715 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 MED8Q96G25 268 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 MIPEPQ99797 713 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 PHACTR1Q9C0D0 580 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SLC7A5P2Q9GIP4 190 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SPRTNQ9H040 489 aaPredicted RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 ACTL8Q9H568 366 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SAYSD1Q9NPB0 183 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 SRPK3Q9UPE1 567 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 FARSAQ9Y285 508 aaKnown RBP11.37□□□□□ -0.59
RFC4-202ENST00000392481 FER1L5A0AVI2 2057 aa11.37□□□□□ -0.59
RFC4-202ENST00000392481 E7ENX8 843 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 SLC16A5O15375 505 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 SYF2O95926 243 aaKnown RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 PRB1P04280 392 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 TUBB4AP04350 444 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 C8GP07360 202 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 RAB40ALP0C0E4 278 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 SFTPCP11686 197 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 AGXTP21549 392 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 FDXRP22570 491 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 CMPK1P30085 196 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 RPA3P35244 121 aaPredicted RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 CCR10P46092 362 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 PLTPP55058 493 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 IL2P60568 153 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 TAP2Q03519 686 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ILF2Q12905 390 aaKnown RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 TCTE1Q5JU00 501 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 HECTD2Q5U5R9 776 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 FAM45BPQ6NSW5 357 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 C16orf46Q6P387 395 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 CYS1Q717R9 158 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 MYO1HQ8N1T3 1032 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
RFC4-202ENST00000392481 EXD3Q8N9H8 876 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 FAM45AQ8TCE6 357 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 PROKR1Q8TCW9 393 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 MCOLN3Q8TDD5 553 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ZNF480Q8WV37 535 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ZNF285Q96NJ3 590 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ACAT2Q9BWD1 397 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 NLNQ9BYT8 704 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 PARVBQ9HBI1 364 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 ENAMQ9NRM1 1142 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 PSAT1Q9Y617 370 aa11.36□□□□□ -0.59
RFC4-202ENST00000392481 KIF2AO00139 706 aaPredicted RBP11.35□□□□□ -0.59
RFC4-202ENST00000392481 SRPX2O60687 465 aaPredicted RBP11.35□□□□□ -0.59
RFC4-202ENST00000392481 CTSVO60911 334 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 CCNDBP1O95273 360 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 TSPAN12O95859 305 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 CAPN1P07384 714 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 CTSBP07858 339 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 GSTA2P09210 222 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 PRDX1Q06830 199 aaKnown RBP11.35□□□□□ -0.59
RFC4-202ENST00000392481 SP140Q13342 867 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 ERV3-1Q14264 604 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 DEFB109BQ30KR1 87 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 PTCHD3Q3KNS1 767 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 ATP1A1-AS1Q5TC04 95 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 LCN10Q6JVE6 187 aa11.35□□□□□ -0.59
RFC4-202ENST00000392481 SUSD1Q6UWL2 747 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms