RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MPOP05164 745 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 STMN1P16949 149 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 NEDD8Q15843 81 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 FASTKD1Q53R41 847 aaKnown RBP18.51■□□□□ 0.55
CCDC50-202ENST00000392456 YIF1BQ5BJH7 314 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 HECTD2Q5U5R9 776 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 TMEM207Q6UWW9 146 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 GDPD4Q6W3E5 623 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 ZCCHC23Q6ZST2 131 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 TMEM151AQ8N4L1 468 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 BRD9Q9H8M2 597 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 SARDHQ9UL12 918 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 LOC100653049A0A140TA62 436 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 KRT34O76011 436 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 SEC14L2O76054 403 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 NNMTP40261 264 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 RECQLP46063 649 aaPredicted RBP18.5■□□□□ 0.55
CCDC50-202ENST00000392456 ZRANB3Q5FWF4 1079 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 AFTPHQ6ULP2 937 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 FAM151BQ6UXP7 276 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 NXNL1Q96CM4 212 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 MOCOSQ96EN8 888 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 CCDC120Q96HB5 630 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 ACOX2Q99424 681 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 RTKNQ9BST9 563 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 IL26Q9NPH9 171 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 PLSCR3Q9NRY6 295 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 DDX28Q9NUL7 540 aaKnown RBP18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TOR4AQ9NXH8 423 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TLK1Q9UKI8 766 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 VWA7Q9Y334 891 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TCF20Q9UGU0 1960 aaKnown RBP18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TBC1D3BA6NDS4 549 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 SCO1O75880 301 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 SLITRK5O94991 958 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 BPGMP07738 259 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 SBK3P0C264 359 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 BMP4P12644 408 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 BPIP17213 487 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 MS4A2Q01362 244 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 PTSQ03393 145 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TYSND1Q2T9J0 566 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 LRRC66Q68CR7 880 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 YAF2Q8IY57 180 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 MARC2Q969Z3 335 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 ELSPBP1Q96BH3 223 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 TMEM80Q96HE8 168 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 GPR78Q96P69 363 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 SEMA6AQ9H2E6 1030 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 RPRD1BQ9NQG5 326 aaKnown RBP18.5■□□□□ 0.55
CCDC50-202ENST00000392456 ACTR3BQ9P1U1 418 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 PKP3Q9Y446 797 aa18.5■□□□□ 0.55
CCDC50-202ENST00000392456 ARNTLO00327 626 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 PCLAFQ15004 111 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 ESCO2Q56NI9 601 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 ERAP2Q6P179 960 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
CCDC50-202ENST00000392456 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 WFIKKN2Q8TEU8 576 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 SNX19Q92543 992 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 ACSS2Q9NR19 701 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 RUVBL2Q9Y230 463 aaKnown RBP18.49■□□□□ 0.55
CCDC50-202ENST00000392456 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 ACOT9Q9Y305 439 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 PPIL1Q9Y3C6 166 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 DGKBQ9Y6T7 804 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 UBA6A0AVT1 1052 aaPredicted RBP18.49■□□□□ 0.55
CCDC50-202ENST00000392456 CENPXA8MT69 81 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 GSNP06396 782 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 SRPRAP08240 638 aaKnown RBP18.49■□□□□ 0.55
CCDC50-202ENST00000392456 GNAO1P09471 354 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 COX4I1P13073 169 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 CLCN5P51795 746 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 POU4F1Q01851 419 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 AADATQ8N5Z0 425 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 OR2T3Q8NH03 318 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 LPGAT1Q92604 370 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 RIPOR3Q96MK2 946 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 MCCC1Q96RQ3 725 aaPredicted RBP18.49■□□□□ 0.55
CCDC50-202ENST00000392456 B4GALT6Q9UBX8 382 aa18.49■□□□□ 0.55
CCDC50-202ENST00000392456 H7C0S8 307 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 RAD51BO15315 384 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 FMO4P31512 558 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 ZNF234Q14588 700 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 ZFP69Q49AA0 526 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 PIGGQ5H8A4 983 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 C10orf107Q8IVU9 208 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 GPR26Q8NDV2 337 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 SLC22A8Q8TCC7 542 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 LYSMD1Q96S90 227 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 GALPQ9UBC7 116 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 WBP11Q9Y2W2 641 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 COL6A3P12111 3177 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 ISPDA4D126 451 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 BCAS2O75934 225 aaPredicted RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 JUNBP17275 347 aaPredicted RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 OGNP20774 298 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 CD40LGP29965 261 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 GPR85P60893 370 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 AQP6Q13520 282 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms