RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SYVN1Q86TM6 617 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 OR2L3Q8NG85 312 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 OR2A1Q8NGT9 310 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 MCOLN3Q8TDD5 553 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 DLG3Q92796 817 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 PKP4Q99569 1192 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 FAM129AQ9BZQ8 928 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 SAYSD1Q9NPB0 183 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 ENAMQ9NRM1 1142 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 PCMTD2Q9NV79 361 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 EURLQ9NYK6 297 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 IL17BQ9UHF5 180 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 VWA7Q9Y334 891 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 CELSR3Q9NYQ7 3312 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 A0A1W2PPV9 198 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 C9J4A7 227 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF749O43361 778 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 SRPX2O60687 465 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-203ENST00000391855 CD63P08962 238 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 GRIA3P42263 894 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 ARSFP54793 590 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 IL2P60568 153 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 BORAQ6PGQ7 559 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 STRA8Q7Z7C7 330 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 SYTL1Q8IYJ3 562 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 C2orf73Q8N5S3 287 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 LINGO1Q96FE5 620 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 CCDC138Q96M89 665 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 DHRS4Q9BTZ2 278 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 RHOJQ9H4E5 214 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 TXLNGQ9NUQ3 528 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 IRAK4Q9NWZ3 460 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 TXNDC16Q9P2K2 825 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 ITPR1Q14643 2758 aa12.18□□□□□ -0.46
GGPS1-203ENST00000391855 OR2A25A4D2G3 310 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 E7ENX8 843 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 H3BMH7 237 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 NKX2-8O15522 239 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 KATNA1O75449 491 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 CREG1O75629 220 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 SLC16A8O95907 504 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 SYF2O95926 243 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ENO2P09104 434 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 HIST1H2AGP0C0S8 130 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 HIST1H2ADP20671 130 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 F8A1P23610 371 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PTPN4P29074 926 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PLTPP55058 493 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 CDKN2DP55273 166 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 AP1S2P56377 157 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 TIAL1Q01085 375 aaKnown RBP eCLIP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 TAP2Q03519 686 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 GRM7Q14831 915 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 TBR1Q16650 682 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 FCRL6Q6DN72 434 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PAQR3Q6TCH7 311 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PCSK4Q6UW60 755 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ZC3HC1Q86WB0 502 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 MCATQ8IVS2 390 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 FAM20CQ8IXL6 584 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 TTC29Q8NA56 475 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 SLC38A9Q8NBW4 561 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 FBXO25Q8TCJ0 367 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 EEF1AKMT1Q8WVE0 214 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 MED8Q96G25 268 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PDLIM5Q96HC4 596 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF285Q96NJ3 590 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 MIPEPQ99797 713 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 NLNQ9BYT8 704 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 TRIM54Q9BYV2 358 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PCBD2Q9H0N5 130 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 CHST8Q9H2A9 424 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ADNPQ9H2P0 1102 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PARVBQ9HBI1 364 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 POPDC3Q9HBV1 291 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 MRPS30Q9NP92 439 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 CCDC177Q9NQR7 707 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 SLC17A6Q9P2U8 582 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 POLHQ9Y253 713 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 FARSAQ9Y285 508 aaKnown RBP12.17□□□□□ -0.46
GGPS1-203ENST00000391855 PADI2Q9Y2J8 665 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
GGPS1-203ENST00000391855 LAMA5O15230 3695 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 FAM95CA0A1B0GW59 222 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CTAGE15A4D2H0 777 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CTAGE8P0CG41 777 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 PRKAR1AP10644 381 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CCND1P24385 295 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms