RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 IRX4P78413 519 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CDH18Q13634 790 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ZNF146Q15072 292 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TBCEQ15813 527 aaPredicted RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ATAD3CQ5T2N8 411 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 FIGLAQ6QHK4 219 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 LEKR1Q6ZMV7 388 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CATSPER3Q86XQ3 398 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 DIS3L2Q8IYB7 885 aaKnown RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 AFAP1Q8N556 730 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ESX1Q8N693 406 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SSC4DQ8WTU2 575 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 BADQ92934 168 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ARHGEF2Q92974 986 aaKnown RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 C2orf48Q96LS8 159 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NCAPGQ9BPX3 1015 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CCDC3Q9BQI4 270 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SRSF8Q9BRL6 282 aaKnown RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 PNNQ9H307 717 aaKnown RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 JPT2Q9H910 190 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 PPCSQ9HAB8 311 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 WSB2Q9NYS7 404 aaPredicted RBP1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TAS2R14Q9NYV8 317 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 IL17CQ9P0M4 197 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ZNF581Q9P0T4 197 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 IL17BQ9UHF5 180 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 LNPEPQ9UIQ6 1025 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NENFQ9UMX5 172 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 STUB1Q9UNE7 303 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CMAHPQ9Y471 501 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 DGKBQ9Y6T7 804 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 RUSC2Q8N2Y8 1516 aa1.05□□□□□ -2.24
RNU6-1228P-201ENST00000391014 FEZF1A0PJY2 475 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 GLTPD2A6NH11 291 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TLX2O43763 284 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ERAL1O75616 437 aaKnown RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 KRT33AO76009 404 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NXPH4O95158 308 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 GIG44P09565 113 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SMIM18P0DKX4 95 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 RPL35AP18077 110 aaKnown RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 JAK1P23458 1154 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 BSGP35613 385 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CAMPP49913 170 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 IKQ13123 557 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SGCGQ13326 291 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TMEM132DQ14C87 1099 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TAB1Q15750 504 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 GARNL3Q5VVW2 1013 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 Q7L0L9 218 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ARID3BQ8IVW6 561 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 MAML2Q8IZL2 1156 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ANKRD42Q8N9B4 389 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CSNK1G2-AS1Q8NCQ2 148 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 PAPD5Q8NDF8 572 aaKnown RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 OR10G7Q8NGN6 311 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CHURC1Q8WUH1 139 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NSMAFQ92636 917 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 RPS6KC1Q96S38 1066 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 LMF2Q9BU23 707 aaKnown RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 FNDC11Q9BVV2 318 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NYXQ9GZU5 481 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SERINC1Q9NRX5 453 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 FAM207AQ9NSI2 230 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SAGE1Q9NXZ1 904 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ZNF69Q9UC07 566 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NAALAD2Q9Y3Q0 740 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 GRIP1Q9Y3R0 1128 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NME7Q9Y5B8 376 aa1.04□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ARID2Q68CP9 1835 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 IGHV3-38A0A0C4DH36 116 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 C2orf81A6NN90 581 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 K7EQD1 137 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SLC33A1O00400 549 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 HS6ST1O60243 411 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TPPPO94811 219 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 VENTXO95231 258 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 OR2C1O95371 312 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 RENP00797 406 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SRPRAP08240 638 aaKnown RBP1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SUPT20HL2P0C7V6 817 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 PTPN3P26045 913 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CSTF2P33240 577 aaKnown RBP eCLIP1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 UCNP55089 124 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 CASP6P55212 293 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ERVK-16P61578 105 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 DHODHQ02127 395 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 LMOD3Q0VAK6 560 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ZNF177Q13360 481 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 Q1RN00 199 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 ODF4Q2M2E3 257 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 UTF1Q5T230 341 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 WSCD1Q658N2 575 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NCEH1Q6PIU2 408 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 IGFL2Q6UWQ7 119 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 TMPRSS11FQ6ZWK6 438 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 SERINC5Q86VE9 423 aa1.03□□□□□ -2.24
RNU6-1228P-201ENST00000391014 NUDT13Q86X67 352 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms