RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 SP3Q02447 781 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 NPTX1Q15818 432 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 XKR3Q5GH77 459 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 SLC35D3Q5M8T2 416 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 ARHGAP17Q68EM7 881 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 VSIG1Q86XK7 387 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 THNSL1Q8IYQ7 743 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 NIPA2Q8N8Q9 360 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 BMPERQ8N8U9 685 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 TRIM58Q8NG06 486 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 OR2T11Q8NH01 316 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 LGALS12Q96DT0 336 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 SPAG5Q96R06 1193 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 EGFL8Q99944 293 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 KATNB1Q9BVA0 655 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZMYND12Q9H0C1 365 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 Q9H8V8 135 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 CHST11Q9NPF2 352 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 KCNK7Q9Y2U2 307 aa3.95□□□□□ -1.78
SNORA40.2-201ENST00000390847 IGHV4-4A0A075B6R2 117 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 PSMD14O00487 310 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 EPHB6O15197 1021 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 KRT86O43790 486 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZG16O60844 167 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 TBCAO75347 108 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 DDHD2O94830 711 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 GSRP00390 522 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 QDPRP09417 244 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 CEACAM1P13688 526 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ACAT1P24752 427 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 NKX2-1P43699 371 aaPredicted RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 LBX1P52954 281 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ATP12AP54707 1039 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 SNRPD1P62314 119 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 GNB1P62873 340 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 DLK1P80370 383 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 GCNT1Q02742 428 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 HNRNPDQ14103 355 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 RBM39Q14498 530 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 KRT81Q14533 505 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZNF273Q14593 569 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 NONOQ15233 471 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 FAM133BQ5BKY9 247 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 LCN1P1Q5VSP4 162 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ENPP7Q6UWV6 458 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 C11orf57Q6ZUT1 292 aaPredicted RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 FAM47EQ6ZV65 393 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 RAB42Q8N4Z0 105 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 RASGEF1AQ8N9B8 481 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 NOA1Q8NC60 698 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 SETD6Q8TBK2 473 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZMAT2Q96NC0 199 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 CCDC3Q9BQI4 270 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 FERMT1Q9BQL6 677 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 BARHL1Q9BZE3 327 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 CPVLQ9H3G5 476 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 TLE6Q9H808 572 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 DNAJC4Q9NNZ3 241 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 GSN-AS1Q9NRJ2 163 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 C19orf25Q9UFG5 118 aaPredicted RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 MRPS28Q9Y2Q9 187 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 TCF20Q9UGU0 1960 aaKnown RBP3.94□□□□□ -1.78
SNORA40.2-201ENST00000390847 A0A1W2PPK0 400 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 ANXA2P2A6NMY6 339 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SNX3O60493 162 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 GPIP06744 558 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 FAM157CP0CG43 387 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 PDGFRAP16234 1089 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 LHCGRP22888 699 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 ALDH4A1P30038 563 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 CDC25CP30307 473 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 HSD17B3P37058 310 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 VAMP7P51809 220 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 NR0B1P51843 470 aaKnown RBP3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 CAPZA1P52907 286 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 ILF2Q12905 390 aaKnown RBP3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 TMEM30BQ3MIR4 351 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 OR4A47Q6IF82 309 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SUSD1Q6UWL2 747 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 G2E3Q7L622 706 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 KIRREL3Q8IZU9 778 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 DDHD1Q8NEL9 900 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 GPRC5AQ8NFJ5 357 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 OR10Q1Q8NGQ4 319 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 TMEM190Q8WZ59 177 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 DYRK2Q92630 601 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SPATA17Q96L03 361 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SPATA33Q96N06 139 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 LITAFQ99732 161 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 MGME1Q9BQP7 344 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 RBM4Q9BWF3 364 aaKnown RBP3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SHARPINQ9H0F6 387 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 FAM49AQ9H0Q0 323 aaPredicted RBP3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 SNX25Q9H3E2 840 aa3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZCCHC17Q9NP64 241 aaKnown RBP3.93□□□□□ -1.78
SNORA40.2-201ENST00000390847 ZNF71Q9NQZ8 489 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms