RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 E7ENX8 843 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 NDC80O14777 642 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 CTSVO60911 334 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 VPS26AO75436 327 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 KATNA1O75449 491 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 OR2B3O76000 313 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TSPAN12O95859 305 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 CATP04040 527 aaKnown RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 FAM87AP0C7U9 286 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 PRKAR1AP10644 381 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 PSMB5P28074 263 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 HSD17B2P37059 387 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 YBX1P67809 324 aaKnown RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TAP2Q03519 686 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 C19orf57Q0VDD7 668 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 SF1Q15637 639 aaKnown RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 UGT8Q16880 541 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TLDC1Q6P9B6 456 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 MAATS1Q7Z4T9 603 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TAX1BP1Q86VP1 789 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 MCATQ8IVS2 390 aaKnown RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 CPNE9Q8IYJ1 553 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 SYTL1Q8IYJ3 562 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 GPR135Q8IZ08 494 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 BBOF1Q8ND07 529 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 OR2L3Q8NG85 312 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 GABPB2Q8TAK5 448 aaPredicted RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 ADAMTS17Q8TE56 1095 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 ZNF480Q8WV37 535 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 SMPDL3AQ92484 453 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 MR1Q95460 341 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 NDNQ99608 321 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 MCMBPQ9BTE3 642 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 FAM114A2Q9NRY5 505 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 INTS7Q9NVH2 962 aaKnown RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TAS2R13Q9NYV9 303 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 SLC17A6Q9P2U8 582 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 TUBD1Q9UJT1 453 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 CORO1CQ9ULV4 474 aaPredicted RBP10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 KCNMB2Q9Y691 235 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 FLNCQ14315 2725 aa10.94□□□□□ -0.66
IGHV4-28-201ENST00000390612 IGKV1-8A0A0C4DH67 115 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 OR2A25A4D2G3 310 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 FITM1A5D6W6 292 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 ZSCAN9O15535 394 aaPredicted RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SLC16A8O95907 504 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SFTPCP11686 197 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 MCM3P25205 808 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 CCR10P46092 362 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PNLIPRP1P54315 467 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 RPS18P62269 152 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 RPS15P62841 145 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 RELAQ04206 551 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 C2orf54Q08AI8 447 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PDIA2Q13087 525 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 ERV3-1Q14264 604 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 DEFB109BQ30KR1 87 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PTCHD3Q3KNS1 767 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 ZNF425Q6IV72 752 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 LRRC8EQ6NSJ5 796 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 UGT3A1Q6NUS8 523 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 C16orf46Q6P387 395 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 FBXO42Q6P3S6 717 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PAQR3Q6TCH7 311 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 CYS1Q717R9 158 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PIWIL4Q7Z3Z4 852 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SYVN1Q86TM6 617 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 ANKMY2Q8IV38 441 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 RAB42Q8N4Z0 105 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PROKR1Q8TCW9 393 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 EEF1AKMT1Q8WVE0 214 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 APOBEC4Q8WW27 367 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SEC14L1Q92503 715 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 CLIP3Q96DZ5 547 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 CFAP36Q96G28 342 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 MIPEPQ99797 713 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SLC6A20Q9NP91 592 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 TRMT6Q9UJA5 497 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 TSR3Q9UJK0 312 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SRPK3Q9UPE1 567 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 POLHQ9Y253 713 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 PSAT1Q9Y617 370 aa10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 SPENQ96T58 3664 aaKnown RBP10.93□□□□□ -0.66
IGHV4-28-201ENST00000390612 EIF3HO15372 352 aaKnown RBP eCLIP10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 SLC16A5O15375 505 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 ZBTB14O43829 449 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 NRP2O60462 931 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 SRPX2O60687 465 aaPredicted RBP10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 KLF7O75840 302 aaPredicted RBP10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 C1QAP02745 245 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 ITGAXP20702 1163 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 FDXRP22570 491 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 IMPA1P29218 277 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 POLE2P56282 527 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 NFKB2Q00653 900 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 PRDX1Q06830 199 aaKnown RBP10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 MGAT5Q09328 741 aa10.92□□□□□ -0.66
IGHV4-28-201ENST00000390612 IL10RAQ13651 578 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms