RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 TRIM48Q8IWZ4 208 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF784Q8NCA9 323 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC9A7Q96T83 725 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 MYOCQ99972 504 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 ZSCAN5AQ9BUG6 496 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 PSORS1C1Q9UIG5 152 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 KLHL21Q9UJP4 597 aa14.3□□□□□ -0.12
VPS9D1-201ENST00000389386 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 MEIS3P2A8K0S8 358 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 B4DXG7 233 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 OR2B3O76000 313 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 CCNYL3P0C7X3 344 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ADORA3P0DMS8 318 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 UROSP10746 265 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 POU3F3P20264 500 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 NRIP1P48552 1158 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TIAL1Q01085 375 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SCAPQ12770 1279 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 FBXO48Q5FWF7 155 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TIGD3Q6B0B8 471 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 LAMTOR1Q6IAA8 161 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 RANBP10Q6VN20 620 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 GALNT7Q86SF2 657 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 UNC93AQ86WB7 457 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 OR10Q1Q8NGQ4 319 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 RHEBL1Q8TAI7 183 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF675Q8TD23 568 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 NTAN1Q96AB6 310 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 HDHD5Q9BXW7 423 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 MRPL9Q9BYD2 267 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC22A4Q9H015 551 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 C3orf14Q9HBI5 128 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TRMT6Q9UJA5 497 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SNX7Q9UNH6 387 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 CFL2Q9Y281 166 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 V9GYH0 126 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SERPINA1P01009 418 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 IL1RNP18510 177 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 HLA-DMAP28067 261 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SNTA1Q13424 505 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TAB1Q15750 504 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF79Q15937 498 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 FBXO43Q4G163 708 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ANKS6Q68DC2 871 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SNX20Q7Z614 316 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 VWA5B2Q8N398 1253 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ARRDC4Q8NCT1 418 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 LILRB1Q8NHL6 650 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 NETO1Q8TDF5 533 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 BLOC1S5Q8TDH9 187 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 UBASH3BQ8TF42 649 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ASB15Q8WXK1 588 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TBC1D20Q96BZ9 403 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 REPS1Q96D71 796 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 PYURFQ96I23 114 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 ZFP42Q96MM3 310 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 TTLL2Q9BWV7 592 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 DYRK4Q9NR20 520 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 HEBP1Q9NRV9 189 aa14.29□□□□□ -0.12
VPS9D1-201ENST00000389386 SMIM28A0A1B0GU29 152 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 F9P00740 461 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 C1QBP02746 253 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 G6PDP11413 515 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CSTF2P33240 577 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 GEMP55040 296 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 RPP38P78345 283 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 ASAH1Q13510 395 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 NOMO2Q5JPE7 1267 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 Q6ZSR9 355 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 NLRP8Q86W28 1048 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF557Q8N988 423 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 NCLNQ969V3 563 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FRMD6Q96NE9 622 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 PSKH2Q96QS6 385 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 PITX2Q99697 317 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 KLK4Q9Y5K2 254 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 IFRD1O00458 451 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CLDN5O00501 218 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 BET1O15155 118 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 F2P00734 622 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CDK1P06493 297 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CD72P21854 359 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FDXRP22570 491 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 MAGEA2P43356 314 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CRISP3P54108 245 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 AIF1P55008 147 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 DDR2Q16832 855 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 DCAF4L1Q3SXM0 396 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 HFE2Q6ZVN8 426 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms