RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CYCSP99999 105 aaKnown RBP1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 KLC1Q07866 573 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 NFATC2Q13469 925 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 LY6DQ14210 128 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 BECN1Q14457 450 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 IL11RAQ14626 422 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 RRS1Q15050 365 aaKnown RBP1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 VWC2Q2TAL6 325 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZNF772Q68DY9 489 aaPredicted RBP1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 MFSD12Q6NUT3 480 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 TMEM207Q6UWW9 146 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 LEKR1Q6ZMV7 388 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 NUP54Q7Z3B4 507 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 RTN4RL2Q86UN3 420 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 EID3Q8N140 333 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 NIPA2Q8N8Q9 360 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 PTERQ96BW5 349 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 CFAP57Q96MR6 1250 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 SFXN2Q96NB2 322 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 MUS81Q96NY9 551 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 USP28Q96RU2 1077 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 ABHD1Q96SE0 405 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 SYT15Q9BQS2 421 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRIM51Q9BSJ1 452 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 CABLES2Q9BTV7 478 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 MXD3Q9BW11 206 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 CCDC106Q9BWC9 280 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 CLEC7AQ9BXN2 247 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 OPA3Q9H6K4 179 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 OR6C2Q9NZP2 312 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 STK26Q9P289 416 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 CHORDC1Q9UHD1 332 aaPredicted RBP1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 WDR37Q9Y2I8 494 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 PADI2Q9Y2J8 665 aa1.95□□□□□ -2.1
RNU6-541P-201ENST00000384709 RAI1Q7Z5J4 1906 aaPredicted RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 IGKV3D-20A0A0C4DH25 116 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRBV5-5A0A0J9YX44 114 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 hCG_1809904A0A1W2PP81 198 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 A0A1W2PPE2 198 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 A0A1W2PR64 198 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CASTOR2A6NHX0 329 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 ERI2A8K979 691 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 E9PQ18 207 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SOCS3O14543 225 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 ARPC2O15144 300 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 IPO8O15397 1037 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CEACAM4O75871 244 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SORBS2O94875 1100 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRUB2O95900 331 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 FYNP06241 537 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 ABCB1P08183 1280 aaPredicted RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 MYOGP15173 224 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CDH3P22223 829 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 PTPN3P26045 913 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 TLX1P31314 330 aaPredicted RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CSTF2P33240 577 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 MAPK12P53778 367 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 KRTAP10-3P60369 221 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 GCNT1Q02742 428 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 GUCY2DQ02846 1103 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 DRP2Q13474 957 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CUL3Q13618 768 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 ALCAMQ13740 583 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SNTB1Q13884 538 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 EFTUD2Q15029 972 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SGSM1Q2NKQ1 1148 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 HLA-BQ31612 363 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 KRT71Q3SY84 523 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 FASTKD1Q53R41 847 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 C2CD6Q53TS8 623 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SLC25A53Q5H9E4 307 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 LYSMD4Q5XG99 296 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 STXBP4Q6ZWJ1 553 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 BTN2A1Q7KYR7 527 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 KRT74Q7RTS7 529 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 CAMKMTQ7Z624 323 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 HOGA1Q86XE5 327 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 LYG1Q8N1E2 194 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 AVL9Q8NBF6 648 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 XXYLT1Q8NBI6 393 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 POGLUT1Q8NBL1 392 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 APPL2Q8NEU8 664 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 APOBEC4Q8WW27 367 aaKnown RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 PIGBQ92521 554 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 MOB3AQ96BX8 217 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 MAP3K3Q99759 626 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 VGLL1Q99990 258 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 TLE6Q9H808 572 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM207AQ9NSI2 230 aaPredicted RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 PPP2R2CQ9Y2T4 447 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 MAGED1Q9Y5V3 778 aaPredicted RBP1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM169AQ9Y6X4 670 aa1.94□□□□□ -2.1
RNU6-541P-201ENST00000384709 SPATA31D1Q6ZQQ2 1576 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZNF318Q5VUA4 2279 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SHISA7A6NL88 538 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 A8MV72 311 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 TEX28O15482 410 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SPRY1O43609 319 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 ATP6AP2O75787 350 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 NXPH2O95156 264 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms