RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 MRM3Q9HC36 420 aaKnown RBP3.67□□□□□ -1.82
SMC6-202ENST00000381272 ABCC13Q9NSE7 274 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 TBC1D13Q9NVG8 400 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.67□□□□□ -1.82
SMC6-202ENST00000381272 MARCH4Q9P2E8 410 aaPredicted RBP3.67□□□□□ -1.82
SMC6-202ENST00000381272 GIMAP2Q9UG22 337 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 BCAP29Q9UHQ4 241 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
SMC6-202ENST00000381272 RAB26Q9ULW5 256 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 PADI3Q9ULW8 664 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 TBC1D30Q9Y2I9 924 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 CRYL1Q9Y2S2 319 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 DOCK4Q8N1I0 1966 aa3.67□□□□□ -1.82
SMC6-202ENST00000381272 HEATR9A2RTY3 570 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 C9JVG2 144 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 NR5A2O00482 541 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MRASO14807 208 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 VILLO15195 856 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 AP1G1O43747 822 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 TADA2AO75478 443 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SUPT7LO94864 414 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 CELF2O95319 508 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 TBX18O95935 607 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 CLPTM1O96005 669 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 TFAP2AP05549 437 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PIRTP0C851 137 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PABPC4LP0CB38 370 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 PRSS56P0CW18 603 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 HKR1P10072 659 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 BMP5P22003 454 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 TGM1P22735 817 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 GCSHP23434 173 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 DNAJB1P25685 340 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 CALRP27797 417 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 HOXC8P31273 242 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 HOXC13P31276 330 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 CYP2C18P33260 490 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 LEPRP48357 1165 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 KPNA2P52292 529 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 CDH13P55290 713 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 RPL26P61254 145 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 TSPY1Q01534 308 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 ZNF33AQ06730 810 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 STX5Q13190 355 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 TP53BP2Q13625 1128 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 GRB7Q14451 532 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SQLEQ14534 574 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 RFTN1Q14699 578 aaPredicted RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 PSMD5Q16401 504 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 NFE2Q16621 373 aaPredicted RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 SLC5A9Q2M3M2 681 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MYLK3Q32MK0 819 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 NADK2Q4G0N4 442 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 UNC50Q53HI1 259 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 ALFQ53S48 1182 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MTX3Q5HYI7 312 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SIRPB2Q5JXA9 342 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 BRMS1LQ5PSV4 323 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MARC1Q5VT66 337 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 HMBOX1Q6NT76 420 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PPP4R4Q6NUP7 873 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 TAF2Q6P1X5 1199 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 ZFP1Q6P2D0 407 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 KLC3Q6P597 504 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 ZNF549Q6P9A3 640 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PIWIL4Q7Z3Z4 852 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 MRPL10Q7Z7H8 261 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 AMIGO2Q86SJ2 522 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 HERC6Q8IVU3 1022 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PGBD5Q8N414 524 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 RTL3Q8N8U3 475 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 CATSPER1Q8NEC5 780 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 OR13J1Q8NGT2 312 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 GPR150Q8NGU9 434 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 RSPH1Q8WYR4 309 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 NCSTNQ92542 709 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 IGSF8Q969P0 613 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PSMG2Q969U7 264 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 EME1Q96AY2 570 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SLCO4A1Q96BD0 722 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PTERQ96BW5 349 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 IMP4Q96G21 291 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 SLC45A3Q96JT2 553 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PRICKLE1Q96MT3 831 aaPredicted RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 KCNA7Q96RP8 456 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PRPF18Q99633 342 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 SLC39A3Q9BRY0 314 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MTG1Q9BT17 334 aaPredicted RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 SLC25A51Q9H1U9 297 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SMOC2Q9H3U7 446 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 GSTO2Q9H4Y5 243 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 Q9H521 79 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 MEAF6Q9HAF1 191 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 EML4Q9HC35 981 aaKnown RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 TDP1Q9NUW8 608 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 FBXO34Q9NWN3 711 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 ZIM2Q9NZV7 527 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 AP4S1Q9Y587 144 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 PTGDR2Q9Y5Y4 395 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms