RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 CBX6O95503 412 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 PIM1P11309 404 aaPredicted RBP16.14■□□□□ 0.17
SMN2-201ENST00000380741 CDC25BP30305 580 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
SMN2-201ENST00000380741 BASP1P80723 227 aaKnown RBP16.14■□□□□ 0.17
SMN2-201ENST00000380741 RPS6KA1Q15418 735 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CCNG2Q16589 344 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CRB2Q5IJ48 1285 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CTSL3PQ5NE16 218 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 MEI1Q5TIA1 1274 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 PRAMEF13Q5VWM6 474 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CNSTQ6PJW8 725 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CUZD1Q86UP6 607 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 LRRC6Q86X45 466 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 OTUD6BQ8N6M0 293 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 HMGCLL1Q8TB92 370 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
SMN2-201ENST00000380741 ERRFI1Q9UJM3 462 aaPredicted RBP16.14■□□□□ 0.17
SMN2-201ENST00000380741 PCDHGA10Q9Y5H3 936 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 HS3ST3B1Q9Y662 390 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 CRYBG3Q68DQ2 2970 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 FITM1A5D6W6 292 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 KPNA5O15131 536 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 MED26O95402 600 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 DDAH2O95865 285 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 ARNTP27540 789 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 VSX2P58304 361 aaPredicted RBP16.13■□□□□ 0.17
SMN2-201ENST00000380741 WASHC2DQ5SRD0 308 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 FRMPD2BQ6IN97 320 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 DRICH1Q6PGQ1 229 aaPredicted RBP16.13■□□□□ 0.17
SMN2-201ENST00000380741 KIRREL2Q6UWL6 708 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 RAB42Q8N4Z0 105 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 OR2L3Q8NG85 312 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 MFSD3Q96ES6 412 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 BIRC8Q96P09 236 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 MIPEPQ99797 713 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 MRM3Q9HC36 420 aaKnown RBP16.13■□□□□ 0.17
SMN2-201ENST00000380741 SYBUQ9NX95 663 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 BFARQ9NZS9 450 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 TSR3Q9UJK0 312 aaKnown RBP16.13■□□□□ 0.17
SMN2-201ENST00000380741 NTNG1Q9Y2I2 539 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 KLK4Q9Y5K2 254 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 MRFAP1Q9Y605 127 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 COPG1Q9Y678 874 aaKnown RBP16.13■□□□□ 0.17
SMN2-201ENST00000380741 MAU2Q9Y6X3 613 aa16.13■□□□□ 0.17
SMN2-201ENST00000380741 POLEQ07864 2286 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 HEATR5BQ9P2D3 2071 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 A0A0J9YVX5 310 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 A0A1W2PPV9 198 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 ANKUB1A6NFN9 424 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 GOLGA8KD6RF30 607 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 GOLGA8TH3BQL2 631 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 VAPBO95292 243 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 MGAT1P26572 445 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 CCNFP41002 786 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 GLRBP48167 497 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 NPY2RP49146 381 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 HIF1AQ16665 826 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 FAM214AQ32MH5 1076 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 CES3Q6UWW8 571 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 C4orf22Q6V702 233 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 OR2A1Q8NGT9 310 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 FAM136AQ96C01 138 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 FOPNLQ96NB1 174 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 BARD1Q99728 777 aaKnown RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 WDR77Q9BQA1 342 aaPredicted RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 KIFC1Q9BW19 673 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 NXT1Q9UKK6 140 aaKnown RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 DRG1Q9Y295 367 aaKnown RBP16.12■□□□□ 0.17
SMN2-201ENST00000380741 FAM169AQ9Y6X4 670 aa16.12■□□□□ 0.17
SMN2-201ENST00000380741 LOC105369274A0A096LPK9 316 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 LOC102723532A0A0G2JNH3 316 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 HYKKA2RU49 373 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 VSTM2BA6NLU5 285 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 AP3B1O00203 1094 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 NIPSNAP2O75323 286 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 LDLRP01130 860 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 FMO4P31512 558 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 KCNJ1P48048 391 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
SMN2-201ENST00000380741 FASTKQ14296 549 aaKnown RBP16.11■□□□□ 0.17
SMN2-201ENST00000380741 GBX1Q14549 363 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 RBBP7Q16576 425 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 TYSND1Q2T9J0 566 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 TUBB8Q3ZCM7 444 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 AGAP7PQ5VUJ5 663 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 MRNIPQ6NTE8 343 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 IGFL2Q6UWQ7 119 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 RNF44Q7L0R7 432 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 GSTA5Q7RTV2 222 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 LURAP1LQ8IV03 231 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 PARP9Q8IXQ6 854 aa16.11■□□□□ 0.17
SMN2-201ENST00000380741 OR4N4Q8N0Y3 316 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms