RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TNFAIP8L3Q5GJ75 292 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ASRGL1Q7L266 308 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 STK32CQ86UX6 486 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CLVS1Q8IUQ0 354 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 KBTBD2Q8IY47 623 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RBM15BQ8NDT2 890 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SPATA22Q8NHS9 363 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CPT1CQ8TCG5 803 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SLC44A1Q8WWI5 657 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 EME1Q96AY2 570 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PIWIL1Q96J94 861 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SMAD5Q99717 465 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 EBNA1BP2Q99848 306 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 IER2Q9BTL4 223 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RNF38Q9H0F5 515 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SEMA6AQ9H2E6 1030 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TM9SF3Q9HD45 589 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ADAP2Q9NPF8 381 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TAGLN3Q9UI15 199 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CYTH4Q9UIA0 394 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PLAGL1Q9UM63 463 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SNX11Q9Y5W9 270 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 COL5A3P25940 1745 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 HGFP14210 728 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PRKCHP24723 683 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ASPAP45381 313 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 FAM189BP81408 668 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SLC10A7Q0GE19 358 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TARDBPQ13148 414 aaKnown RBP eCLIP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CA9Q16790 459 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PCID2Q5JVF3 399 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 FAM69BQ5VUD6 431 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CERS6Q6ZMG9 384 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 DEFB107AQ8IZN7 70 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 DACT3Q96B18 629 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TBATAQ96M53 351 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 LGR4Q9BXB1 951 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ADA2Q9NZK5 511 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 DGKBQ9Y6T7 804 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 M0QZQ0 153 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PI15O43692 258 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CD63P08962 238 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 EEF1DP29692 281 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 UQCRC1P31930 480 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SLC7A9P82251 487 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SLC25A11Q02978 314 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CACNG1Q06432 222 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 BNIP3Q12983 259 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 NSDHLQ15738 373 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 GFRALQ6UXV0 394 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ARPINQ7Z6K5 226 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 GALNT7Q86SF2 657 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 AMIGO2Q86SJ2 522 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ZMIZ2Q8NF64 920 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 OR13H1Q8NG92 308 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 BIRC7Q96CA5 298 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 LINGO1Q96FE5 620 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RNF32Q9H0A6 362 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RETREG1Q9H6L5 497 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TRNAU1APQ9NX07 287 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 TAC3Q9UHF0 121 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ANGPT4Q9Y264 503 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PCDHGA5Q9Y5G8 931 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 EPOPA6NHQ4 379 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 J3KR12 359 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RBP1P09455 135 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 FTH1P19P0C7X4 201 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 T-ENOLP0DO92 83 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PSMD4P55036 377 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 MRPS22P82650 360 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PPP2R2BQ00005 443 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 FOLH1Q04609 750 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 NOMO1Q15155 1222 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CHRNA6Q15825 494 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 STK11Q15831 433 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 DNAL1Q4LDG9 190 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 UNC5AQ6ZN44 842 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CDHR3Q6ZTQ4 885 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ETFBKMTQ8IXQ9 262 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 RBM12BQ8IXT5 1001 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ULK2Q8IYT8 1036 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 MPP5Q8N3R9 675 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ASB15Q8WXK1 588 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 CCDC74AQ96AQ1 378 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF641Q96N77 438 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 THUMPD3Q9BV44 507 aaKnown RBP6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SPATA9Q9BWV2 254 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 SDCBP2Q9H190 292 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 PTGES2Q9H7Z7 377 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 POLR1BQ9H9Y6 1135 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 MAT2BQ9NZL9 334 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 ARFGEF1Q9Y6D6 1849 aa6.38□□□□□ -1.39
NEDD9-202ENST00000379446 A0A0A0MRY4 1105 aa6.37□□□□□ -1.39
NEDD9-202ENST00000379446 NDUFS4O43181 175 aa6.37□□□□□ -1.39
NEDD9-202ENST00000379446 ATF6P18850 670 aa6.37□□□□□ -1.39
NEDD9-202ENST00000379446 SERPINB5P36952 375 aa6.37□□□□□ -1.39
NEDD9-202ENST00000379446 CHN2P52757 468 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms