RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PRICKLE1Q96MT3 831 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 STRA6Q9BX79 667 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 RBMX2Q9Y388 322 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 RIIAD1A6NNX1 92 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 IQCF5A8MTL0 148 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CACNB4O00305 520 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 SNNO75324 88 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 INMTO95050 263 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 IFNA16P05015 189 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CBSLP0DN79 551 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CTSEP14091 401 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 LAG3P18627 525 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CBSP35520 551 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 YAP1P46937 504 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 HMGCS1Q01581 520 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 POM121L1PQ3SYA9 428 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 OGFRL1Q5TC84 451 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 FRG2Q64ET8 278 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 TMC8Q8IU68 726 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 DRAXINQ8NBI3 349 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 TXNDC5Q8NBS9 432 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 HSPBAP1Q96EW2 488 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 SUSD3Q96L08 255 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 FRG2BQ96QU4 278 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 EBPLQ9BY08 206 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ADAMTS10Q9H324 1103 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ITM2CQ9NQX7 267 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ZDHHC3Q9NYG2 299 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 SLC2A6Q9UGQ3 507 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 NDOR1Q9UHB4 597 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CHURC1-FNTBB4DL54 471 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 STBD1O95210 358 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TOP3BO95985 862 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 EBLN1P0CF75 366 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SAGP10523 405 aaPredicted RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 SELPP16109 830 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SLC15A1P46059 708 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 DGKQP52824 942 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 UFM1P61960 85 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TAF13Q15543 124 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ZNF404Q494X3 552 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ADGRF1Q5T601 910 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 PRR23CQ6ZRP0 262 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 LGI4Q8N135 537 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 FAM98AQ8NCA5 519 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 RHEBL1Q8TAI7 183 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SLC22A17Q8WUG5 538 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 EXOSC8Q96B26 276 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 RTP4Q96DX8 246 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 BIRC8Q96P09 236 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 COL21A1Q96P44 957 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 FCRL4Q96PJ5 515 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MAPKAP1Q9BPZ7 522 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 HEPHQ9BQS7 1158 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 FAM120CQ9NX05 1096 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 NKIRAS2Q9NYR9 191 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SPATA7Q9P0W8 599 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MYADML2A6NDP7 307 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 A6NHS1 94 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 OR2AG2A6NM03 316 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SLC38A8A6NNN8 435 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 HAS3O00219 553 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 HMGN1P05114 100 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CD72P21854 359 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CLDN10P78369 228 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 RABL3Q5HYI8 236 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TPRG1LQ5T0D9 272 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SLC2A7Q6PXP3 512 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 WDTC1Q8N5D0 677 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 KLHL6Q8WZ60 621 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 KCNJ9Q92806 393 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ISOC1Q96CN7 298 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TM9SF3Q9HD45 589 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SNTG1Q9NSN8 517 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 NEDD8-MDP1E9PL57 170 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 J3QRK9 145 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 GTPBP1O00178 669 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 CDC7O00311 574 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 LSM1O15116 133 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 PCDH7O60245 1069 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SLC25A12O75746 678 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 LDOC1O95751 146 aaPredicted RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 DHRS4L1P0CG22 281 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 POU2F1P14859 743 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 IDSP22304 550 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 HTR1EP28566 365 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CLK3P49761 638 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms