RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 BLKP51451 505 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 ZNF605Q86T29 641 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 ADAMTS15Q8TE58 950 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 TMEM74Q96NL1 305 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 PNPLA3Q9NST1 481 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 USE1Q9NZ43 259 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 SEC14L3Q9UDX4 400 aa14.13□□□□□ -0.15
TCOF1-202ENST00000377797 SERPINI2O75830 405 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 PTGR1Q14914 329 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 RFTN2Q52LD8 501 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 CXorf57Q6NSI4 855 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 DEF8Q6ZN54 512 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 EIF3MQ7L2H7 374 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 GLMNQ92990 594 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 OAS3Q9Y6K5 1087 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TRIM43BA6NCK2 446 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 AQP12BA6NM10 295 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 ADRB3P13945 408 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 HOXB6P17509 224 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 STXBP1P61764 594 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 RFX4Q33E94 735 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 C6orf52Q5T4I8 152 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 AQP12AQ8IXF9 295 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TRIM43Q96BQ3 446 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SORT1Q99523 831 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 MEAF6Q9HAF1 191 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TRIM39Q9HCM9 518 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 STON1Q9Y6Q2 735 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 A0A1W2PQU0 124 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 MPC1LP0DKB6 136 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 KCNA5P22460 613 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 NDUFS1P28331 727 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SLC7A1P30825 629 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 PRKCQQ04759 706 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SLC14A2Q15849 920 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 DNAJB8Q8NHS0 232 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SLC5A11Q8WWX8 675 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 L3HYPDHQ96EM0 354 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 FOCADQ5VW36 1801 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 AXIN1O15169 862 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 OR10H3O60404 316 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 PRAMEF12O95522 483 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 GBAP04062 536 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 KLK1P06870 262 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 CASP9P55211 416 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 DLG1Q12959 904 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 CST6Q15828 149 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SPIN4Q56A73 249 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TMEM214Q6NUQ4 689 aaKnown RBP14.12□□□□□ -0.15
TCOF1-202ENST00000377797 SFRP1Q8N474 314 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TADA1Q96BN2 335 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 VPS35Q96QK1 796 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 DGCR6LQ9BY27 220 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 TMED5Q9Y3A6 229 aa14.12□□□□□ -0.15
TCOF1-202ENST00000377797 A0A1W2PRB8 838 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MROH6A6NGR9 719 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CLIC1O00299 241 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 TRIM24O15164 1050 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MID1O15344 667 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 NOS3P29474 1203 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 IRS1P35568 1242 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 RPS13P62277 151 aaKnown RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 PCTPQ9UKL6 214 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 I6L893 689 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CYP17A1P05093 508 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CYP4B1P13584 511 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CKMT2P17540 419 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 AQP4P55087 323 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 SMIM11AP58511 58 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 RPS21P63220 83 aaKnown RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MEF2AQ02078 507 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 ZNF234Q14588 700 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 FAM46DQ8NEK8 389 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 SLC22A18Q96BI1 424 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 DCUN1D5Q9BTE7 237 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CPEB1Q9BZB8 566 aaKnown RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 BRINP2Q9C0B6 783 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 EXD2Q9NVH0 621 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 TRPS1Q9UHF7 1281 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 ARPC2O15144 300 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 NUDT14O95848 222 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MYOGP15173 224 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 PTX3P26022 381 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MAPK10P53779 464 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 KCNC3Q14003 757 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 C18orf21Q32NC0 220 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 NUDT13Q86X67 352 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 GPR135Q8IZ08 494 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 SVOPQ8N4V2 548 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CENPAP49450 140 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 GRIN2CQ14957 1233 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 TMEM240Q5SV17 173 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 KBTBD6Q86V97 674 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CYP4Z2PQ8N1L4 340 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms