RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ELK3P41970 407 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 IL10RAQ13651 578 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 TCTE1Q5JU00 501 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 ZNF385CQ66K41 422 aaPredicted RBP16.16■□□□□ 0.18
HMGN4-201ENST00000377575 FCRL6Q6DN72 434 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 LCN10Q6JVE6 187 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 PRICKLE2Q7Z3G6 844 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 GALNT7Q86SF2 657 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 MCATQ8IVS2 390 aaKnown RBP16.16■□□□□ 0.18
HMGN4-201ENST00000377575 FBXO15Q8NCQ5 510 aaPredicted RBP16.16■□□□□ 0.18
HMGN4-201ENST00000377575 OR2L3Q8NG85 312 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 SMPDL3AQ92484 453 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 CFAP36Q96G28 342 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 KRT12Q99456 494 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 MIPEPQ99797 713 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 TRIM31Q9BZY9 425 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 TAS2R13Q9NYV9 303 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
HMGN4-201ENST00000377575 GPN3Q9UHW5 284 aaPredicted RBP16.16■□□□□ 0.18
HMGN4-201ENST00000377575 TCFL5Q9UL49 500 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 CHMP2BQ9UQN3 213 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 KLK4Q9Y5K2 254 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 HEATR5BQ9P2D3 2071 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 MKRN2OSH3BPM6 223 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 FANCGO15287 622 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 SLC28A2O43868 658 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 CCNDBP1O95273 360 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 CAPN1P07384 714 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 CD63P08962 238 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 RPA3P35244 121 aaPredicted RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 GRIA3P42263 894 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 RGS4P49798 205 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 ARSFP54793 590 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 DCDP81605 110 aaKnown RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 FASTKQ14296 549 aaKnown RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 C1orf189Q5VU69 101 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 YOD1Q5VVQ6 348 aaPredicted RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 IGDCC3Q8IVU1 814 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 CPNE9Q8IYJ1 553 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 TTC29Q8NA56 475 aaPredicted RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 GBP5Q96PP8 586 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 NDNQ99608 321 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 SELENOSQ9BQE4 189 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 ANKMY1Q9P2S6 941 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 DHCR7Q9UBM7 475 aaKnown RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 NDOR1Q9UHB4 597 aa16.15■□□□□ 0.18
HMGN4-201ENST00000377575 HELZ2Q9BYK8 2649 aaKnown RBP16.15■□□□□ 0.18
HMGN4-201ENST00000377575 CCDC88CQ9P219 2028 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 A0A1W2PPV9 198 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 ZBTB14O43829 449 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 CASQ1P31415 396 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 SKIV2L2P42285 1042 aaKnown RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 CARSP49589 748 aaKnown RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 PNLIPRP1P54315 467 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 TSTA3Q13630 321 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 GRM7Q14831 915 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 LACTB2Q53H82 288 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 HP1BP3Q5SSJ5 553 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 STEAP4Q687X5 459 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 APLFQ8IW19 511 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 OR2A1Q8NGT9 310 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 ASB11Q8WXH4 323 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 ABHD17AQ96GS6 310 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 PKP4Q99569 1192 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 MRPS30Q9NP92 439 aaKnown RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 UTP6Q9NYH9 597 aaKnown RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 IFT80Q9P2H3 777 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 CORO1CQ9ULV4 474 aaPredicted RBP16.14■□□□□ 0.17
HMGN4-201ENST00000377575 TEX264Q9Y6I9 313 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
HMGN4-201ENST00000377575 A0A1B0GX78 115 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 GFYI3L273 518 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 J3QKU1 62 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 SLC16A8O95907 504 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 CTSBP07858 339 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 MCM3P25205 808 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 RPL21P46778 160 aaKnown RBP16.13■□□□□ 0.17
HMGN4-201ENST00000377575 SP140Q13342 867 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 FRG1Q14331 258 aaKnown RBP16.13■□□□□ 0.17
HMGN4-201ENST00000377575 MLIPQ5VWP3 458 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 SUSD1Q6UWL2 747 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 UBE2R2Q712K3 238 aaPredicted RBP16.13■□□□□ 0.17
HMGN4-201ENST00000377575 RNF44Q7L0R7 432 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 PIWIL4Q7Z3Z4 852 aaKnown RBP16.13■□□□□ 0.17
HMGN4-201ENST00000377575 MAATS1Q7Z4T9 603 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 RAB43Q86YS6 212 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 PALM2Q8IXS6 379 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 ADAMTS17Q8TE56 1095 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 PWWP2AQ96N64 755 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 ACAT2Q9BWD1 397 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 ENAMQ9NRM1 1142 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 MDC1Q14676 2089 aaKnown RBP16.13■□□□□ 0.17
HMGN4-201ENST00000377575 ANKRD12Q6UB98 2062 aa16.13■□□□□ 0.17
HMGN4-201ENST00000377575 FAM187AA6NFU0 413 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 CTSVO60911 334 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 AHSGP02765 367 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms