RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TPSAB1Q15661 275 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 TTC27Q6P3X3 843 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 LRRC8BQ6P9F7 803 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 TTC23LQ6PF05 361 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 CNSTQ6PJW8 725 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 MAMDC2Q7Z304 686 aaPredicted RBP18.39■□□□□ 0.53
CBWD3-204ENST00000377349 SDCCAG8Q86SQ7 713 aaPredicted RBP18.39■□□□□ 0.53
CBWD3-204ENST00000377349 CUZD1Q86UP6 607 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 DCUN1D3Q8IWE4 304 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 EURLQ9NYK6 297 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 IL1RAPL1Q9NZN1 696 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 PLCL2Q9UPR0 1127 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 CSAG2Q9Y5P2 127 aa18.39■□□□□ 0.53
CBWD3-204ENST00000377349 PEX12O00623 359 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 ONECUT2O95948 504 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 ALPPP05187 535 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 CD63P08962 238 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 MAGP20916 626 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 AOAHP28039 575 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 MRNIPQ6NTE8 343 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 TRIM56Q9BRZ2 755 aaKnown RBP18.38■□□□□ 0.53
CBWD3-204ENST00000377349 TXLNGQ9NUQ3 528 aa18.38■□□□□ 0.53
CBWD3-204ENST00000377349 CPAMD8Q8IZJ3 1885 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 KRT87PA6NCN2 255 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 AGPSO00116 658 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 PFDN6O15212 129 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 IGHEP01854 428 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 F7P08709 466 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-204ENST00000377349 DCTP40126 519 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 ANKRD22Q5VYY1 191 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 COX15Q7KZN9 410 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 MPP5Q8N3R9 675 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 NDC1Q9BTX1 674 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 ILKAPQ9H0C8 392 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-204ENST00000377349 SLC6A20Q9NP91 592 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 ENAMQ9NRM1 1142 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 SOX13Q9UN79 622 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 CRYL1Q9Y2S2 319 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 JRKLQ9Y4A0 524 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 NFS1Q9Y697 457 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 APCP25054 2843 aa18.37■□□□□ 0.53
CBWD3-204ENST00000377349 TEP1Q99973 2627 aaKnown RBP18.36■□□□□ 0.53
CBWD3-204ENST00000377349 ANKUB1A6NFN9 424 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 SOCS6O14544 535 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 NIPSNAP2O75323 286 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 ALOX12BO75342 701 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 GPC4O75487 556 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 PAMP19021 973 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 CD9P21926 228 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 MMP11P24347 488 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 CDK16Q00536 496 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 KCNJ11Q14654 390 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 SF1Q15637 639 aaKnown RBP18.36■□□□□ 0.53
CBWD3-204ENST00000377349 FCRL6Q6DN72 434 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 UNC5DQ6UXZ4 953 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 LRRC6Q86X45 466 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 FKBP10Q96AY3 582 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 ZNF669Q96BR6 464 aaPredicted RBP18.36■□□□□ 0.53
CBWD3-204ENST00000377349 FOPNLQ96NB1 174 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 SPSB2Q99619 263 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 KIFC1Q9BW19 673 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 P2RY12Q9H244 342 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 ATP13A2Q9NQ11 1180 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 FBXL4Q9UKA2 621 aa18.36■□□□□ 0.53
CBWD3-204ENST00000377349 A0A1B0GX78 115 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 E5RI56 91 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 IPO13O94829 963 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 CHRM3P20309 590 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 ARNTP27540 789 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 AIMP2Q13155 320 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 TSTA3Q13630 321 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 NKG7Q16617 165 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 CYP2A13Q16696 494 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 CTSL3PQ5NE16 218 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 RNF187Q5TA31 235 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 CCDC137Q6PK04 289 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 IGFL2Q6UWQ7 119 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 TTLL10Q6ZVT0 673 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 MCATQ8IVS2 390 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 SLC35F6Q8N357 371 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 ZADH2Q8N4Q0 377 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 RAB42Q8N4Z0 105 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 NACC2Q96BF6 587 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 PBKQ96KB5 322 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 ZNF285Q96NJ3 590 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 SLC26A1Q9H2B4 701 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 MRM3Q9HC36 420 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 SLC5A6Q9Y289 635 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 HS3ST3B1Q9Y662 390 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
CBWD3-204ENST00000377349 SCN2AQ99250 2005 aa18.35■□□□□ 0.53
CBWD3-204ENST00000377349 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 RASGRF2O14827 1237 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 KPNA5O15131 536 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 KLHL41O60662 606 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 SLCO2B1O94956 709 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 MCM3P25205 808 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 COILP38432 576 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms