RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FTH1P02794 183 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 B4GALNT1Q00973 533 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 CARD16Q5EG05 197 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 TPGS2Q68CL5 300 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 TXNDC8Q6A555 127 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 PIK3C3Q8NEB9 887 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 ZNF566Q969W8 418 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 EGLN2Q96KS0 407 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 PRRG1O14668 218 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 NDUFS2O75306 463 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 LAPTM4AQ15012 233 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 ATP13A5Q4VNC0 1218 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 DGKKQ5KSL6 1271 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 LRRC66Q68CR7 880 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 OR4F3Q6IEY1 312 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 CYP4Z1Q86W10 505 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 ANKRD13BQ86YJ7 626 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 ABHD11Q8NFV4 315 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 PYCR2Q96C36 320 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 BARD1Q99728 777 aaKnown RBP24.61■■□□□ 1.53
C9orf40-201ENST00000376854 KLHL42Q9P2K6 505 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 ABCG2Q9UNQ0 655 aa24.61■■□□□ 1.53
C9orf40-201ENST00000376854 MKI67P46013 3256 aaKnown RBP24.61■■□□□ 1.53
C9orf40-201ENST00000376854 SCN8AQ9UQD0 1980 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 ZNF99A8MXY4 864 aaPredicted RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 ANGPTL1O95841 491 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 PRPH2P23942 346 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 PHEXP78562 749 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 HSPA14Q0VDF9 509 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 ATP1A4Q13733 1029 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 TMCO2Q7Z6W1 182 aaPredicted RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 APOLD1Q96LR9 279 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 LYSMD1Q96S90 227 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 SLC12A9Q9BXP2 914 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 CLEC4EQ9ULY5 219 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 COQ6Q9Y2Z9 468 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 TMED5Q9Y3A6 229 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 UGT2B11O75310 529 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 HIST1H2AGP0C0S8 130 aaPredicted RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 HIST1H2ADP20671 130 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 ATN1P54259 1190 aaPredicted RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 PTPN5P54829 565 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 EMX1Q04741 257 aaPredicted RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 LMAN2Q12907 356 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 GTF2H3Q13889 308 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 LDLRAP1Q5SW96 308 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 TCAIMQ8N3R3 496 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 SETD9Q8NE22 299 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 CHPT1Q8WUD6 406 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 AUTS2Q8WXX7 1259 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 HIST1H2AHQ96KK5 128 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 HIST1H2AJQ99878 128 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 H2AFJQ9BTM1 129 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 RIBC2Q9H4K1 309 aa24.6■■□□□ 1.53
C9orf40-201ENST00000376854 THG1LQ9NWX6 298 aaKnown RBP24.6■■□□□ 1.53
C9orf40-201ENST00000376854 ANAPC1Q9H1A4 1944 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 EVPLLA8MZ36 301 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 IL1RL1Q01638 556 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 GSTM4Q03013 218 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 CTF1Q16619 201 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 PTCHD3Q3KNS1 767 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 OR2T5Q6IEZ7 315 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 NEK5Q6P3R8 708 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 TPRG1Q6ZUI0 275 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 CEP68Q76N32 757 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 OR2AP1Q8NGE2 309 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 OR2T29Q8NH02 315 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 MCOLN3Q8TDD5 553 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 FAR1Q8WVX9 515 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 GABARAPL1Q9H0R8 117 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 ZNF334Q9HCZ1 680 aaPredicted RBP24.59■■□□□ 1.53
C9orf40-201ENST00000376854 AASDHPPTQ9NRN7 309 aa24.59■■□□□ 1.53
C9orf40-201ENST00000376854 ZNF106Q9H2Y7 1883 aaKnown RBP24.59■■□□□ 1.53
C9orf40-201ENST00000376854 BOLA2-SMG1P6H3BVE0 249 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 C8GP07360 202 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 CYP4B1P13584 511 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 AMD1P17707 334 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 KIR3DL1P43629 444 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 BOP1Q14137 746 aaKnown RBP24.58■■□□□ 1.53
C9orf40-201ENST00000376854 SIM2Q14190 667 aaPredicted RBP24.58■■□□□ 1.53
C9orf40-201ENST00000376854 SERPINA11Q86U17 422 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 L3MBTL4Q8NA19 623 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 NELL1Q92832 810 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 FAM210AQ96ND0 272 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 IL1RAPQ9NPH3 570 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ERGIC3Q9Y282 383 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 B3GNT3Q9Y2A9 372 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 MYO1GB0I1T2 1018 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 M0QX08 132 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 BNIP3LO60238 219 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 SULT1C4O75897 302 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 OR56A5P0C7T3 313 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 AOAHP28039 575 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ARHGDIAP52565 204 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ITGADQ13349 1161 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ZCCHC8Q6NZY4 707 aaKnown RBP24.58■■□□□ 1.53
C9orf40-201ENST00000376854 RFLNAQ6ZTI6 216 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 FAM217AQ8IXS0 508 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ASB11Q8WXH4 323 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 TBC1D20Q96BZ9 403 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms