RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 STX18Q9P2W9 335 aaKnown RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 NPIPB8E9PQR5 432 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 H0YIV9 168 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 FXYD1O00168 92 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TRIM38O00635 465 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 FKBP6O75344 327 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 KELP23276 732 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 CASP2P42575 452 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 CLCNKAP51800 687 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TDGQ13569 410 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 LIX1Q8N485 282 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 OR5K2Q8NHB8 316 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 HOPXQ9BPY8 73 aaPredicted RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 TIMM29Q9BSF4 260 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 IL1RL2Q9HB29 575 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 MRPL40Q9NQ50 206 aaKnown RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 GID8Q9NWU2 228 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TMEM181Q9P2C4 612 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 LEF1Q9UJU2 399 aaPredicted RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 CFAP20Q9Y6A4 193 aaKnown RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 DYTNA2CJ06 578 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 RPN2P04844 631 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 SLC35G4P0C7Q5 338 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 MS4A2Q01362 244 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TLR1Q15399 786 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 PYCR3Q53H96 274 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 PAGE3Q5JUK9 113 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 SLCO4C1Q6ZQN7 724 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TMPRSS11BQ86T26 416 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TRIM69Q86WT6 500 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 RNF175Q8N4F7 328 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 MINDY1Q8N5J2 469 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 SLC26A7Q8TE54 656 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 LRRC58Q96CX6 371 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 CMTM7Q96FZ5 175 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 IL17FQ96PD4 163 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 BTBD1Q9H0C5 482 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 MOSPD1Q9UJG1 213 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 PLAGL1Q9UM63 463 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
CTTN-203ENST00000376561 TDRKHQ9Y2W6 561 aaKnown RBP17.12■□□□□ 0.33
CTTN-203ENST00000376561 PRORSD1PA6NEY8 169 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 POM121BA6NF01 834 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 LATO43561 262 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 TCN1P20061 433 aaPredicted RBP17.11■□□□□ 0.33
CTTN-203ENST00000376561 VARSP26640 1264 aaKnown RBP17.11■□□□□ 0.33
CTTN-203ENST00000376561 SLC7A2P52569 658 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 AP2B1P63010 937 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 CSTF3Q12996 717 aaKnown RBP17.11■□□□□ 0.33
CTTN-203ENST00000376561 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 CAPRIN2Q6IMN6 1127 aaKnown RBP17.11■□□□□ 0.33
CTTN-203ENST00000376561 AAGABQ6PD74 315 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 Q6ZS52 159 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 GALNT13Q8IUC8 556 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 FAM156AQ8NDB6 213 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 DENND6BQ8NEG7 585 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 HMGB4Q8WW32 186 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 OSGEPL1Q9H4B0 414 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 SH2B3Q9UQQ2 575 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 PCDHGA11Q9Y5H2 935 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 BCKDHAP12694 445 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 CLDN2P57739 230 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 SLC34A1Q06495 639 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 FLOT2Q14254 428 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 FLCNQ8NFG4 579 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 NUDT8Q8WV74 236 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 APIPQ96GX9 242 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 MTERF1Q99551 399 aaKnown RBP17.11■□□□□ 0.33
CTTN-203ENST00000376561 SGK2Q9HBY8 427 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 CD300AQ9UGN4 299 aa17.11■□□□□ 0.33
CTTN-203ENST00000376561 LRRC72A6NJI9 287 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 PI15O43692 258 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 ANP32DO95626 131 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 NFYCQ13952 458 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 CAPRIN1Q14444 709 aaKnown RBP17.1■□□□□ 0.33
CTTN-203ENST00000376561 SAMD4BQ5PRF9 694 aaKnown RBP17.1■□□□□ 0.33
CTTN-203ENST00000376561 CATSPEREQ5SY80 951 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 PRMT9Q6P2P2 845 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 HLA-CQ95604 372 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 WDR34Q96EX3 536 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 SCARF2Q96GP6 870 aaPredicted RBP17.1■□□□□ 0.33
CTTN-203ENST00000376561 DPY30Q9C005 99 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 FGF22Q9HCT0 170 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 S100A14Q9HCY8 104 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 STOML1Q9UBI4 398 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 ABCD2Q9UBJ2 740 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 SUCOQ9UBS9 1254 aaKnown RBP17.1■□□□□ 0.33
CTTN-203ENST00000376561 DLGAP4Q9Y2H0 992 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms