RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 IL22Q9GZX6 179 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 MVB12BQ9H7P6 319 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 IRAK4Q9NWZ3 460 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 ZDHHC3Q9NYG2 299 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 BFARQ9NZS9 450 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 TCAF1Q9Y4C2 921 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 AP1M2Q9Y6Q5 423 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 PDZD2O15018 2839 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 CELSR1Q9NYQ6 3014 aa12.62□□□□□ -0.39
CLCN6-205ENST00000376492 TCRBV7S3A2A0A539 114 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 CCDC78A2IDD5 438 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 CCDC162PA2VCL2 907 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ATP1B2P14415 290 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ITGAXP20702 1163 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 TSFMP43897 325 aaKnown RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 SESN2P58004 480 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 SARNPP82979 210 aaKnown RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ZNF169Q14929 603 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 KCTD19Q17RG1 926 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 PRAMEF13Q5VWM6 474 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ARMC3Q5W041 872 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 IGFL2Q6UWQ7 119 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 UNC5AQ6ZN44 842 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ZNF534Q76KX8 674 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 TAS2R42Q7RTR8 314 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 PIANPQ8IYJ0 282 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 MCUQ8NE86 351 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 OR5AR1Q8NGP9 310 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 FLVCR1-AS1Q8TAF5 88 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 TFGQ92734 400 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-205ENST00000376492 HDAC10Q969S8 669 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
CLCN6-205ENST00000376492 C17orf113A0A1B0GUU1 675 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 SOCS6O14544 535 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 STSP08842 583 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 CHRM5P08912 532 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-205ENST00000376492 PRSS56P0CW18 603 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 MMP11P24347 488 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 FOXN2P32314 431 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 VPS41P49754 854 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 DBN1Q16643 649 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 SHISA6Q6ZSJ9 500 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 FAM20CQ8IXL6 584 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLCN6-205ENST00000376492 AGAP4Q96P64 663 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 SLX1AQ9BQ83 275 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 MESP1Q9BRJ9 268 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 MRM3Q9HC36 420 aaKnown RBP12.6□□□□□ -0.39
CLCN6-205ENST00000376492 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 PLAGL1Q9UM63 463 aa12.6□□□□□ -0.39
CLCN6-205ENST00000376492 A0A0J9YY10 115 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 OR51F1A6NGY5 319 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 AP2A2O94973 939 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 GOT2P00505 430 aaKnown RBP12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CD63P08962 238 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 TPBGLP0DKB5 382 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 MLNP12872 115 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 PEBP1P30086 187 aaKnown RBP12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CD151P48509 253 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 KCNK10P57789 538 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 ITIH4Q14624 930 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 ANKRD22Q5VYY1 191 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 TLDC1Q6P9B6 456 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 AFTPHQ6ULP2 937 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 KIRREL2Q6UWL6 708 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 COX15Q7KZN9 410 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CAND1Q86VP6 1230 aaKnown RBP12.59□□□□□ -0.39
CLCN6-205ENST00000376492 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CATSPER1Q8NEC5 780 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 OR4L1Q8NH43 312 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-205ENST00000376492 SPSB2Q99619 263 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 CHRNA10Q9GZZ6 450 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
CLCN6-205ENST00000376492 KLHL20Q9Y2M5 609 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 HS3ST3B1Q9Y662 390 aa12.59□□□□□ -0.39
CLCN6-205ENST00000376492 AKAP9Q99996 3911 aa12.58□□□□□ -0.4
CLCN6-205ENST00000376492 A0A1B0GUH1 482 aa12.58□□□□□ -0.4
CLCN6-205ENST00000376492 MAGEB16A2A368 324 aa12.58□□□□□ -0.4
CLCN6-205ENST00000376492 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-205ENST00000376492 GSTM1P09488 218 aa12.58□□□□□ -0.4
CLCN6-205ENST00000376492 ALAS2P22557 587 aa12.58□□□□□ -0.4
CLCN6-205ENST00000376492 MGAT1P26572 445 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms