RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 APRTP07741 180 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 ZSCAN5DPP0CG00 497 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 PPARGP37231 505 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 VSX2P58304 361 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 YBX1P67809 324 aaKnown RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 SNX1Q13596 522 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 TCTE1Q5JU00 501 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 WASHC2DQ5SRD0 308 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 AGAP7PQ5VUJ5 663 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 FRMPD2BQ6IN97 320 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 SLC13A5Q86YT5 568 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 ST6GALNAC3Q8NDV1 305 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 OR11G2Q8NGC1 345 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 ZUFSPQ96AP4 578 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 RAD51AP1Q96B01 352 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 AGAP4Q96P64 663 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 MRM3Q9HC36 420 aaKnown RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 TREX1Q9NSU2 369 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 CATSPERZQ9NTU4 200 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 ZNF148Q9UQR1 794 aa14.29□□□□□ -0.12
CLCN6-204ENST00000376491 RUVBL2Q9Y230 463 aaKnown RBP14.29□□□□□ -0.12
CLCN6-204ENST00000376491 LOC105369274A0A096LPK9 316 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 LOC102723532A0A0G2JNH3 316 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 A0A0J9YVX5 310 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 TARM1B6A8C7 271 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 CD3EAPO15446 510 aaKnown RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 FKBP9O95302 570 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 CRADDP78560 199 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 TMED2Q15363 201 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 RBBP7Q16576 425 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 FAM214AQ32MH5 1076 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 TUBB8Q3ZCM7 444 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 AARS2Q5JTZ9 985 aaKnown RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 PCID2Q5JVF3 399 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 OR4N4Q8N0Y3 316 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 PPHLN1Q8NEY8 458 aaKnown RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 OR2L3Q8NG85 312 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 OR2A1Q8NGT9 310 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 HMGCLL1Q8TB92 370 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 GRHL3Q8TE85 626 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 PANX3Q96QZ0 392 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 MIPEPQ99797 713 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 RAB11FIP5Q9BXF6 653 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 AGPAT4Q9NRZ5 378 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 SEMA3GQ9NS98 782 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 STOX2Q9P2F5 926 aaPredicted RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 ANAPC5Q9UJX4 755 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 NXT1Q9UKK6 140 aaKnown RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 TTC7AQ9ULT0 858 aaPredicted RBP14.28□□□□□ -0.12
CLCN6-204ENST00000376491 KLK4Q9Y5K2 254 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 MYO9AB2RTY4 2548 aa14.28□□□□□ -0.12
CLCN6-204ENST00000376491 CRYBG3Q68DQ2 2970 aa14.27□□□□□ -0.12
CLCN6-204ENST00000376491 HYKKA2RU49 373 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 SRPX2O60687 465 aaPredicted RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 KLHL18O94889 574 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 RPS3P23396 243 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 NMBRP28336 390 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 RPL22P35268 128 aaKnown RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 TSFMP43897 325 aaKnown RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 TTPAP49638 278 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 SESN2P58004 480 aaPredicted RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 FASTKQ14296 549 aaKnown RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 CTSL3PQ5NE16 218 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 SEL1L2Q5TEA6 688 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 STT3BQ8TCJ2 826 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 THOC3Q96J01 351 aaKnown RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 CNDP1Q96KN2 507 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 FRMD8P1Q9BZ68 369 aaPredicted RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 LHPPQ9H008 270 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 PAK5Q9P286 719 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 ZC3H7BQ9UGR2 993 aaKnown RBP14.27□□□□□ -0.13
CLCN6-204ENST00000376491 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 MYO7BQ6PIF6 2116 aa14.27□□□□□ -0.13
CLCN6-204ENST00000376491 ARNTP27540 789 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 KLC1Q07866 573 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CDC16Q13042 620 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 ZNF169Q14929 603 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-204ENST00000376491 SIX1Q15475 284 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-204ENST00000376491 FBXO42Q6P3S6 717 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 TTC23LQ6PF05 361 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CNSTQ6PJW8 725 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 RNF44Q7L0R7 432 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 OTOAQ7RTW8 1153 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 LAPTM4BQ86VI4 370 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 PRSS58Q8IYP2 241 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CATSPER1Q8NEC5 780 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 FAR1Q8WVX9 515 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 C10orf90Q96M02 699 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CRB3Q9BUF7 120 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 SYNPO2LQ9H987 977 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 ZNF304Q9HCX3 659 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 IL1RAPL1Q9NZN1 696 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CELSR2Q9HCU4 2923 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 CENPEQ02224 2701 aa14.26□□□□□ -0.13
CLCN6-204ENST00000376491 OR2A25A4D2G3 310 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms