RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 YIPF1Q9Y548 306 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 PCDHGB1Q9Y5G3 927 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 AGAP14A8MT82 685 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 MYO1GB0I1T2 1018 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 M0QX08 132 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZSCAN9O15535 394 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 MAN1A2O60476 641 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 HIST1H2AGP0C0S8 130 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 HOXB9P17482 250 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 HIST1H2ADP20671 130 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 FSHRP23945 695 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 MAGEA2P43356 314 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 PPP3CCP48454 512 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 CSNK1DP48730 415 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 CD97P48960 835 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZXDBP98169 803 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 HSPA14Q0VDF9 509 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZXDCQ2QGD7 858 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 OR2T5Q6IEZ7 315 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZCCHC8Q6NZY4 707 aaKnown RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 CRTC1Q6UUV9 634 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZNF551Q7Z340 670 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZSWIM9Q86XI8 627 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 CRIPAKQ8N1N5 446 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 OR2T29Q8NH02 315 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 PYCR2Q96C36 320 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 HIST1H2AHQ96KK5 128 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 COPS8Q99627 209 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 HIST1H2AJQ99878 128 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 H2AFJQ9BTM1 129 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 THG1LQ9NWX6 298 aaKnown RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 ERVK-18Q9QC07 812 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 NPIPB15A6NHN6 443 aaPredicted RBP14.15□□□□□ -0.14
MSH5-201ENST00000375703 FMO3P31513 532 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 DAPP51397 102 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 CCR3P51677 355 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 SLC14A1Q13336 389 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 NPTX1Q15818 432 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 EGFLAMQ63HQ2 1017 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 CEP68Q76N32 757 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 LRRC70Q7Z2Q7 622 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 ELMOD1Q8N336 334 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 ADAMTS19Q8TE59 1207 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 RORBQ92753 470 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 APOLD1Q96LR9 279 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
MSH5-201ENST00000375703 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 IL1RAPQ9NPH3 570 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 AASSQ9UDR5 926 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 ABCG2Q9UNQ0 655 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.15□□□□□ -0.14
MSH5-201ENST00000375703 CLDN25C9JDP6 229 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 GREM1O60565 184 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 IGSF6O95976 241 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 CYP4B1P13584 511 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 PORP16435 677 aaPredicted RBP14.15□□□□□ -0.14
MSH5-201ENST00000375703 SERPINA4P29622 427 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 BCAP31P51572 246 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 PTPN5P54829 565 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 RELAQ04206 551 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 PTCHD3Q3KNS1 767 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 DGKKQ5KSL6 1271 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TMEM150AQ86TG1 271 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 PARP8Q8N3A8 854 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TBC1D20Q96BZ9 403 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TM9SF3Q9HD45 589 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 SELENONQ9NZV5 590 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 KLHL42Q9P2K6 505 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 TMED5Q9Y3A6 229 aa14.15□□□□□ -0.14
MSH5-201ENST00000375703 KCNE1BA0A087WTH5 132 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 PABPN1LA6NDY0 278 aaKnown RBP14.14□□□□□ -0.15
MSH5-201ENST00000375703 CLIC1O00299 241 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 GFRA2O00451 464 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 KIR3DL1P43629 444 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ZNF846Q147U1 533 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ACOX1Q15067 660 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 GGTA1PQ4G0N0 100 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 TXNDC8Q6A555 127 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 SERPINA11Q86U17 422 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 TCAIMQ8N3R3 496 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 SCN3BQ9NY72 215 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 INTS6Q9UL03 887 aaKnown RBP14.14□□□□□ -0.15
MSH5-201ENST00000375703 CPQQ9Y646 472 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 AXIN1O15169 862 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ZNF821O75541 412 aaPredicted RBP14.14□□□□□ -0.15
MSH5-201ENST00000375703 DIRAS1O95057 198 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 EFEMP2O95967 443 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 C1QCP02747 245 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 OR56A5P0C7T3 313 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 AMD1P17707 334 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ENGP17813 658 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 PRPH2P23942 346 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 CLK3P49761 638 aaKnown RBP14.14□□□□□ -0.15
MSH5-201ENST00000375703 B4GALNT1Q00973 533 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 LRRC66Q68CR7 880 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms