RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 OR52L1Q8NGH7 329 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 JPH3Q8WXH2 748 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 IL17CQ9P0M4 197 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CHURC1-FNTBB4DL54 471 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 TNFRSF11BO00300 401 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CLDN4O14493 209 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 KMOO15229 486 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 IFNW1P05000 195 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 RPL5P46777 297 aaKnown RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 GSK3BP49841 420 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 C18orf21Q32NC0 220 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 BROXQ5VW32 411 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ADGRG2Q8IZP9 1017 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 OR9A1PQ8NGU1 263 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PNMA8CA0A1B0GUJ8 204 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 UGT2B17O75795 530 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 SCELO95171 688 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 JUNP05412 331 aaKnown RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 EBLN1P0CF75 366 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 RPS9P46781 194 aaKnown RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 DHPSP49366 369 aaPredicted RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 RFTN2Q52LD8 501 aaPredicted RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 ACVR1CQ8NER5 493 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 OR4K1Q8NGD4 311 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 MTERF3Q96E29 417 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 RNFT2Q96EX2 444 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 RC3H2Q9HBD1 1191 aaKnown RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 TOR4AQ9NXH8 423 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 NKX1-2Q9UD57 310 aaPredicted RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 GLOD5A6NK44 160 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 STX16O14662 325 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 MID1O15344 667 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 CDH1P12830 882 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 IGFBP5P24593 272 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PGDP52209 483 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PNLIPRP1P54315 467 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PTSQ03393 145 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 SYVN1Q86TM6 617 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 KBTBD2Q8IY47 623 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 OR8H2Q8N162 312 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 FGF13Q92913 245 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 ARMC5Q96C12 935 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 AURKBQ96GD4 344 aaPredicted RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 SAMD11Q96NU1 681 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 GAL3ST4Q96RP7 486 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PDPK1O15530 556 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 NOBOXO60393 691 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 LATS1O95835 1130 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 FABP3P05413 133 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 C6P13671 934 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 PGFP49763 221 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 TAS2R50P59544 299 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 MBTPS1Q14703 1052 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 FAM26DQ5JW98 314 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 NADSYN1Q6IA69 706 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 KLHDC10Q6PID8 442 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 LUZP2Q86TE4 346 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 GTPBP3Q969Y2 492 aaKnown RBP17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 CRISPLD1Q9H336 500 aa17.49■□□□□ 0.39
PTPDC1-202ENST00000375360 ARID1BQ8NFD5 2236 aaPredicted RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 CPED1A4D0V7 1026 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 DRGXA6NNA5 263 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 GSRP00390 522 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 HIST1H2ABP04908 130 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 ENGP17813 658 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 ADAM17P78536 824 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 HIST3H2AQ7L7L0 130 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 ZCCHC7Q8N3Z6 543 aaKnown RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 HIST1H2ACQ93077 130 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 SLC39A13Q96H72 371 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 RANBP9Q96S59 729 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 CLK4Q9HAZ1 481 aaKnown RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 CLN6Q9NWW5 311 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 OR1A2Q9Y585 309 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 RFXAPO00287 272 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 DLGAP3O95886 979 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 GSTM5P46439 218 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 ZNF155Q12901 538 aaPredicted RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 NDUFA9Q16795 377 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 EOGTQ5NDL2 527 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 NUDT13Q86X67 352 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 WDR36Q8NI36 951 aaKnown RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 A0A1W2PP18 115 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 SERPINB1P30740 379 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 NR1H2P55055 460 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 DNAJB13P59910 316 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 EIF4HQ15056 248 aaKnown RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 RSPO2Q6UXX9 243 aaPredicted RBP17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 PTCHD4Q6ZW05 846 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 HIPK1Q86Z02 1210 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 NRSN1Q8IZ57 195 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 CADM2Q8N3J6 435 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 POMGNT2Q8NAT1 580 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 MDGA1Q8NFP4 955 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 SHKBP1Q8TBC3 707 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 SH3GL3Q99963 347 aa17.48■□□□□ 0.39
PTPDC1-202ENST00000375360 SMPD3Q9NY59 655 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms