RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NUDT13Q86X67 352 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 FAM136AQ96C01 138 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 AKTIPQ9H8T0 292 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 TSPAN1O60635 241 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 TAS2R39P59534 338 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 FKBP1BP68106 108 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 SFT2D3Q587I9 215 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 MSANTD2Q6P1R3 559 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 METTL25Q8N6Q8 603 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 MFSD3Q96ES6 412 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF597Q96LX8 424 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 SRRDQ9UH36 339 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 ATRNL1Q5VV63 1379 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 WNT9AO14904 365 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 DACT2Q5SW24 774 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 OGFOD2Q6N063 350 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 SLC39A3Q9BRY0 314 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CREG1O75629 220 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 GAD2Q05329 585 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 TARDBPQ13148 414 aaKnown RBP eCLIP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 SEC23BQ15437 767 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 HAGHLQ6PII5 290 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 SLC37A3Q8NCC5 494 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ASB15Q8WXK1 588 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 APOLD1Q96LR9 279 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 PPA2Q9H2U2 334 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 AP1G1O43747 822 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ACADMP11310 421 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 GADD45AP24522 165 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 C6orf141Q5SZD1 244 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 C6orf183Q5T699 404 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 DOK6Q6PKX4 331 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ZSWIM9Q86XI8 627 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ZDHHC14Q8IZN3 488 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 LIX1Q8N485 282 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CDC6Q99741 560 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 FKBP7Q9Y680 259 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 MAU2Q9Y6X3 613 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CPNE3O75131 537 aaKnown RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 SSR2P43308 183 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 MRPS6P82932 125 aaKnown RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 SERINC3Q13530 473 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CRY2Q49AN0 593 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CYP4X1Q8N118 509 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CNPPD1Q9BV87 410 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 FAM83DQ9H4H8 585 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ACSL5Q9ULC5 683 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 FAM149AA5PLN7 773 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ELFN1P0C7U0 828 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 TNNI3P19429 210 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 RPS5P46782 204 aaKnown RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 LEPRP48357 1165 aaKnown RBP9.96□□□□□ -0.82
PTCH1-204ENST00000375290 C4orf46Q504U0 113 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 CRB2Q5IJ48 1285 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 COLEC12Q5KU26 742 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 C1orf189Q5VU69 101 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 LGI4Q8N135 537 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 GPR21Q99679 349 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 ACOT13Q9NPJ3 140 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 TAS2R10Q9NYW0 307 aa9.96□□□□□ -0.82
PTCH1-204ENST00000375290 PRSS51A0A1B0GVH4 220 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CLIC1O00299 241 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 DHRS4L1P0CG22 281 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ACTBP60709 375 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ACTG1P63261 375 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 STEAP4Q687X5 459 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 GALNT5Q7Z7M9 940 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CRYBG2Q8N1P7 616 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 JPH3Q8WXH2 748 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 DNAJC1Q96KC8 554 aaKnown RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 VPS29Q9UBQ0 182 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 INMT-MINDY4F8WBC2 141 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FAM171A1Q5VUB5 890 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CLEC6AQ6EIG7 209 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FAAH2Q6GMR7 532 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 DCDC5Q6ZRR9 648 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PDZD9Q8IXQ8 264 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SNX18Q96RF0 628 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 GFM1Q96RP9 751 aaKnown RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ATXN3LQ9H3M9 355 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 STYXL1Q9Y6J8 313 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 UPK1BO75841 260 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SNX4O95219 450 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TUSC3Q13454 348 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 NPY5RQ15761 445 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SLC39A12Q504Y0 691 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PPM1JQ5JR12 505 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FRRS1Q6ZNA5 592 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 JOSD2Q8TAC2 188 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CHPT1Q8WUD6 406 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 BIRC7Q96CA5 298 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 YIPF2Q9BWQ6 316 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ZNHIT2Q9UHR6 403 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 RIMKLBQ9ULI2 386 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 WSCD1Q658N2 575 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ATAD1Q8NBU5 361 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms