RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SIM1P81133 766 aaPredicted RBP8.79□□□□□ -1
UBR4-201ENST00000375218 ATP11AP98196 1134 aa8.79□□□□□ -1
UBR4-201ENST00000375218 SPRED3Q2MJR0 410 aa8.79□□□□□ -1
UBR4-201ENST00000375218 YIF1BQ5BJH7 314 aa8.79□□□□□ -1
UBR4-201ENST00000375218 BRMS1LQ5PSV4 323 aa8.79□□□□□ -1
UBR4-201ENST00000375218 TMEM63BQ5T3F8 832 aa8.79□□□□□ -1
UBR4-201ENST00000375218 CDPF1Q6NVV7 123 aa8.79□□□□□ -1
UBR4-201ENST00000375218 SERPINA13PQ6UXR4 307 aa8.79□□□□□ -1
UBR4-201ENST00000375218 KCTD1Q719H9 257 aa8.79□□□□□ -1
UBR4-201ENST00000375218 LRRC8DQ7L1W4 858 aa8.79□□□□□ -1
UBR4-201ENST00000375218 LRRC17Q8N6Y2 441 aa8.79□□□□□ -1
UBR4-201ENST00000375218 CLEC1AQ8NC01 280 aa8.79□□□□□ -1
UBR4-201ENST00000375218 MAGEC3Q8TD91 643 aa8.79□□□□□ -1
UBR4-201ENST00000375218 LRIG1Q96JA1 1093 aa8.79□□□□□ -1
UBR4-201ENST00000375218 RANBP9Q96S59 729 aa8.79□□□□□ -1
UBR4-201ENST00000375218 PTPN18Q99952 460 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ZYG11BQ9C0D3 744 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ACTL8Q9H568 366 aa8.79□□□□□ -1
UBR4-201ENST00000375218 SLCO1C1Q9NYB5 712 aa8.79□□□□□ -1
UBR4-201ENST00000375218 UVRAGQ9P2Y5 699 aa8.79□□□□□ -1
UBR4-201ENST00000375218 GMPPBQ9Y5P6 360 aa8.79□□□□□ -1
UBR4-201ENST00000375218 TRIM77I1YAP6 450 aa8.78□□□□□ -1
UBR4-201ENST00000375218 CES2O00748 559 aa8.78□□□□□ -1
UBR4-201ENST00000375218 CCND2P30279 289 aa8.78□□□□□ -1
UBR4-201ENST00000375218 MMP12P39900 470 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PSME3P61289 254 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PSPHP78330 225 aa8.78□□□□□ -1
UBR4-201ENST00000375218 BNC1Q01954 994 aa8.78□□□□□ -1
UBR4-201ENST00000375218 OR5M10Q6IEU7 315 aa8.78□□□□□ -1
UBR4-201ENST00000375218 HSDL2Q6YN16 418 aa8.78□□□□□ -1
UBR4-201ENST00000375218 MCATQ8IVS2 390 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 FOXRED2Q8IWF2 684 aa8.78□□□□□ -1
UBR4-201ENST00000375218 FSTL5Q8N475 847 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 ZBTB2Q8N680 514 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PRPF31Q8WWY3 499 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 GTF3AQ92664 365 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 PACRGQ96M98 296 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 DPYSL5Q9BPU6 564 aa8.78□□□□□ -1
UBR4-201ENST00000375218 IFT27Q9BW83 186 aa8.78□□□□□ -1
UBR4-201ENST00000375218 TEKT3Q9BXF9 490 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZNF717Q9BY31 904 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 MAGT1Q9H0U3 335 aa8.78□□□□□ -1
UBR4-201ENST00000375218 EPB41L4BQ9H329 900 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PLEKHA4Q9H4M7 779 aa8.78□□□□□ -1
UBR4-201ENST00000375218 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 ZNF302Q9NR11 478 aa8.78□□□□□ -1
UBR4-201ENST00000375218 KCND2Q9NZV8 630 aa8.78□□□□□ -1
UBR4-201ENST00000375218 VWA7Q9Y334 891 aa8.78□□□□□ -1
UBR4-201ENST00000375218 NFS1Q9Y697 457 aa8.78□□□□□ -1
UBR4-201ENST00000375218 A0A0C4DFX4 3053 aa8.78□□□□□ -1
UBR4-201ENST00000375218 OR2AT4A6NND4 320 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZNF839A8K0R7 811 aa8.78□□□□□ -1
UBR4-201ENST00000375218 N4BP3O15049 544 aa8.78□□□□□ -1
UBR4-201ENST00000375218 MOCS2O96007 188 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 TK1P04183 234 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PLA2G4BP0C869 781 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZNF7P17097 686 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 XRCC1P18887 633 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 PAICSP22234 425 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 SCAPQ12770 1279 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SMCO1Q147U7 214 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZNF618Q5T7W0 954 aa8.78□□□□□ -1
UBR4-201ENST00000375218 KIAA0930Q6ICG6 404 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
UBR4-201ENST00000375218 RNF44Q7L0R7 432 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZFP82Q8N141 532 aa8.78□□□□□ -1
UBR4-201ENST00000375218 UBE2J2Q8N2K1 259 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PYDC1Q8WXC3 89 aa8.78□□□□□ -1
UBR4-201ENST00000375218 FOXJ1Q92949 421 aa8.78□□□□□ -1
UBR4-201ENST00000375218 TP53INP1Q96A56 240 aa8.78□□□□□ -1
UBR4-201ENST00000375218 HOXD1Q9GZZ0 328 aa8.78□□□□□ -1
UBR4-201ENST00000375218 OR2AG1Q9H205 316 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ADAM7Q9H2U9 754 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ASCL3Q9NQ33 180 aa8.78□□□□□ -1
UBR4-201ENST00000375218 GIMAP4Q9NUV9 329 aa8.78□□□□□ -1
UBR4-201ENST00000375218 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
UBR4-201ENST00000375218 HIF3AQ9Y2N7 669 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ARL2BPQ9Y2Y0 163 aa8.78□□□□□ -1
UBR4-201ENST00000375218 IGLV3-22A0A075B6J6 115 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SLC15A5A6NIM6 579 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ASB14A6NK59 587 aa8.78□□□□□ -1
UBR4-201ENST00000375218 POTEB2H3BUK9 544 aa8.78□□□□□ -1
UBR4-201ENST00000375218 FHITP49789 147 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PGDP52209 483 aa8.78□□□□□ -1
UBR4-201ENST00000375218 MESDQ14696 234 aa8.78□□□□□ -1
UBR4-201ENST00000375218 GPR157Q5UAW9 335 aa8.78□□□□□ -1
UBR4-201ENST00000375218 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PSAPL1Q6NUJ1 521 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ZPBP2Q6X784 338 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SSX9Q7RTT3 188 aa8.78□□□□□ -1
UBR4-201ENST00000375218 POLNQ7Z5Q5 900 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SLCO6A1Q86UG4 719 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ELMOD1Q8N336 334 aa8.78□□□□□ -1
UBR4-201ENST00000375218 STEAP2Q8NFT2 490 aa8.78□□□□□ -1
UBR4-201ENST00000375218 OTUB2Q96DC9 234 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PNMA5Q96PV4 448 aa8.78□□□□□ -1
UBR4-201ENST00000375218 CSPG4P5Q96PW8 444 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SLC12A9Q9BXP2 914 aa8.78□□□□□ -1
UBR4-201ENST00000375218 ANKRA2Q9H9E1 313 aa8.78□□□□□ -1
UBR4-201ENST00000375218 RDH8Q9NYR8 311 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms