RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PMS2P3Q13401 168 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 KCNC3Q14003 757 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SUSD1Q6UWL2 747 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TSPAN33Q86UF1 283 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 BEND7Q8N7W2 519 aaPredicted RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 KREMEN2Q8NCW0 462 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CSGALNACT1Q8TDX6 532 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 STARD8Q92502 1023 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 NCLNQ969V3 563 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TBC1D20Q96BZ9 403 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 MUS81Q96NY9 551 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 LRFN3Q9BTN0 628 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TLR9Q9NR96 1032 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SLC25A13Q9UJS0 675 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 C3orf18Q9UK00 162 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 FAF1Q9UNN5 650 aaPredicted RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ORC6Q9Y5N6 252 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 GMEB1Q9Y692 573 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PRRC2BQ5JSZ5 2229 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SCN8AQ9UQD0 1980 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PER2O15055 1255 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CREG1O75629 220 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 AP2A2O94973 939 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 RPL10P27635 214 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CD70P32970 193 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TRPC1P48995 793 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 RAD23AP54725 363 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ZXDBP98169 803 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PPP2R2BQ00005 443 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 UBE3AQ05086 875 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PLCL1Q15111 1095 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PON2Q15165 354 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CARD16Q5EG05 197 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ZC3H12BQ5HYM0 836 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ERICH5Q6P6B1 374 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ADGRG2Q8IZP9 1017 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 OR13F1Q8NGS4 319 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ASB11Q8WXH4 323 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 NELL1Q92832 810 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 BHMTQ93088 406 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 LMLNQ96KR4 655 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SAMD11Q96NU1 681 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TOR3AQ9H497 397 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 FAM118AQ9NWS6 357 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 MAPRE3Q9UPY8 281 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 H3BMQ9 156 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 QSOX1O00391 747 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 PRKD3O94806 890 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 ZNF30P17039 623 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 GSTM2P28161 218 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 GKP32189 559 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 SHMT2P34897 504 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 GZMMP51124 257 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 ERVFC1P60507 584 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 CYP4F8P98187 520 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 PLIN5Q00G26 463 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 CSTF3Q12996 717 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 ZIK1Q3SY52 487 aaPredicted RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 LEXMQ3ZCV2 418 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 LILRA6Q6PI73 481 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 GCNT7Q6ZNI0 430 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 DRAXINQ8NBI3 349 aaPredicted RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 MCOLN3Q8TDD5 553 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 PPP1R14BQ96C90 147 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 FBXL8Q96CD0 374 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 METTL2AQ96IZ6 378 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 FCRL1Q96LA6 429 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 COG8Q96MW5 612 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 CARS2Q9HA77 564 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 INTS6Q9UL03 887 aaKnown RBP13.56□□□□□ -0.24
HMGCL-203ENST00000374490 PCDHB14Q9Y5E9 798 aa13.56□□□□□ -0.24
HMGCL-203ENST00000374490 EVPLLA8MZ36 301 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 C1SP09871 688 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 PCNAP12004 261 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 JUPP14923 745 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 EPORP19235 508 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 PRPS1L1P21108 318 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SPINT3P49223 89 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 EMP3P54852 163 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms