RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CELF5Q8N6W0 485 aaKnown RBP14.02□□□□□ -0.17
TRAF1-201ENST00000373887 COX18Q8N8Q8 333 aa14.02□□□□□ -0.17
TRAF1-201ENST00000373887 RBM18Q96H35 190 aaKnown RBP14.02□□□□□ -0.17
TRAF1-201ENST00000373887 GPATCH1Q9BRR8 931 aaKnown RBP14.02□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF700Q9H0M5 742 aa14.02□□□□□ -0.17
TRAF1-201ENST00000373887 HYKKA2RU49 373 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 MPZL2O60487 215 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 AP2A1O95782 977 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PEX2P28328 305 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 ZYG11AQ6WRX3 759 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 AASSQ9UDR5 926 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PDE10AQ9Y233 779 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 DPPA5A6NC42 116 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 TULP2O00295 520 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 OR4F21O95013 312 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CFHP08603 1231 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CDKL4Q5MAI5 379 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CLEC12AQ5QGZ9 265 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF280BQ86YH2 543 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SUSD3Q96L08 255 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 AGAP2Q99490 1192 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 DPYSL5Q9BPU6 564 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 RIOK2Q9BVS4 552 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 MIOSQ9NXC5 875 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 FBXL12Q9NXK8 326 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 REXO2Q9Y3B8 237 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 MAGEB17A8MXT2 336 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CPNE3O75131 537 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 VNN2O95498 520 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CHRNB2P17787 502 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 RPL10P27635 214 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 IL10RBQ08334 325 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 RAB12Q6IQ22 244 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PDPRQ8NCN5 879 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 OR2L2Q8NH16 312 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SPOCK2Q92563 424 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 POP5Q969H6 163 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 YIPF4Q9BSR8 244 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 WDR26Q9H7D7 661 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PNO1Q9NRX1 252 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 HCN3Q9P1Z3 774 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 TLR6Q9Y2C9 796 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SLIT2O94813 1529 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 IL7RP16871 459 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 MAP3K8P41279 467 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 RORCP51449 518 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 BLMHQ13867 455 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF311Q5JNZ3 666 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 FAM92BQ6ZTR7 304 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 USP43Q70EL4 1123 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SDR16C5Q8N3Y7 309 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SLC35G5Q96KT7 338 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 DNAAF2Q9NVR5 837 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CUEDC1Q9NWM3 386 aaPredicted RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 NUDT4Q9NZJ9 180 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PLIN4Q96Q06 1357 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 DNM1LO00429 736 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 CXCR6O00574 342 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 OAZ2O95190 189 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PCBP2Q15366 365 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 COLEC12Q5KU26 742 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SYVN1Q86TM6 617 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 OR13C4Q8NGS5 318 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 NXPE2Q96DL1 559 aa14.01□□□□□ -0.17
TRAF1-201ENST00000373887 EIF2B4Q9UI10 523 aaKnown RBP14.01□□□□□ -0.17
TRAF1-201ENST00000373887 SHPRHQ149N8 1683 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 TRAFD1O14545 582 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 RENP00797 406 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 SLC35G6P0C7Q6 338 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MTPNP58546 118 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CHIT1Q13231 466 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 GDPD4Q6W3E5 623 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ZDHHC21Q8IVQ6 265 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 LMX1AQ8TE12 382 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 C8orf48Q96LL4 319 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 NKX2-4Q9H2Z4 354 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 GPR89AB7ZAQ6 455 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 E2F3O00716 465 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 PIP5K1BO14986 540 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 SHOX2O60902 331 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 GPR89BP0CG08 455 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ACVRL1P37023 503 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CLNKQ7Z7G1 428 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ZBTB8BQ8NAP8 495 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 FAM46DQ8NEK8 389 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MAGEE1Q9HCI5 957 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MRPS30Q9NP92 439 aaKnown RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 CA14Q9ULX7 337 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ABCG2Q9UNQ0 655 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 FXYD6-FXYD2A0A087WZ82 144 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 EFCAB9A8MZ26 197 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MMP20O60882 483 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 HOXB2P14652 356 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF16P17020 682 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 RGS19P49795 217 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MECP2P51608 486 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms