RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KCTD21Q4G0X4 260 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TIGD2Q4W5G0 525 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 FNDC3BQ53EP0 1204 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 SFT2D3Q587I9 215 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 C9orf64Q5T6V5 341 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ACSM2BQ68CK6 577 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM215Q68D42 235 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 GLYATQ6IB77 296 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 AGTRAPQ6RW13 159 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TRMT11Q7Z4G4 463 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 THOC6Q86W42 341 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ADHFE1Q8IWW8 467 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KBTBD2Q8IY47 623 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 YAF2Q8IY57 180 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 LAS2Q8IYD9 372 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KIAA2013Q8IYS2 634 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KRT78Q8N1N4 520 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 OXR1Q8N573 874 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TRIML2Q8N7C3 387 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 DNAJB14Q8TBM8 379 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CXorf40AQ8TE69 158 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CANT1Q8WVQ1 401 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ELSPBP1Q96BH3 223 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF775Q96BV0 537 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 DGCR14Q96DF8 476 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 NRBF2Q96F24 287 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 REXO5Q96IC2 774 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 QRFPRQ96P65 431 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 OR52E6Q96RD3 313 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 EBF3Q9H4W6 596 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 VCX3AQ9NNX9 186 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 SPATA7Q9P0W8 599 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 BTNL2Q9UIR0 455 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RPS6KA6Q9UK32 745 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CDH7Q9ULB5 785 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RNF11Q9Y3C5 154 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 DYRK1BQ9Y463 629 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 AP4B1Q9Y6B7 739 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 COMMD3-BMI1R4GMX3 469 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RNF103-CHMP3A0A140T963 221 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TCRBV5S2A0A599 114 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF701M0R085 212 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 BNIP3LO60238 219 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LZTS3O60299 673 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TBX19O60806 448 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SEMA3DO95025 777 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 CLPTM1O96005 669 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PDYNP01213 254 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 IFNA14P01570 189 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 APODP05090 189 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 AMD1P17707 334 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TCN1P20061 433 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 GKP32189 559 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 HPCAL1P37235 193 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ETV3P41162 512 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 HALP42357 657 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 GPR1P46091 355 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PFN3P60673 137 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PRKCQQ04759 706 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 DMPKQ09013 629 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 RBBP4Q09028 425 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 CHIT1Q13231 466 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 IL18R1Q13478 541 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 RUNX3Q13761 415 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 CPSF6Q16630 551 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF658BQ4V348 819 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LIN52Q52LA3 116 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ZC3H12BQ5HYM0 836 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PAGE3Q5JUK9 113 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM78AQ5JUQ0 283 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TTC23Q5W5X9 447 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LPCAT4Q643R3 524 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 KRT80Q6KB66 452 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 NOXRED1Q6NXP6 359 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 MED27Q6P2C8 311 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM220Q6QAJ8 160 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LCTLQ6UWM7 567 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SERPINA13PQ6UXR4 307 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 MTSS1LQ765P7 747 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PARS2Q7L3T8 475 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ADGRG5Q8IZF4 528 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LILRA2Q8N149 483 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LIX1Q8N485 282 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 RASGEF1AQ8N9B8 481 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TTLQ8NG68 377 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 OR9A1PQ8NGU1 263 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ITFG1Q8TB96 612 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 WDR20Q8TBZ3 569 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LKAAEAR1Q8TD35 194 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ADAMTS16Q8TE57 1224 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ZFAND2BQ8WV99 257 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TFAP2CQ92754 450 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 C11orf24Q96F05 449 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 AURKBQ96GD4 344 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 HIC2Q96JB3 615 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms