RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 WSCD2Q2TBF2 565 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 RALGPS2Q86X27 583 aaPredicted RBP18.99■□□□□ 0.63
HDAC1-201ENST00000373548 APOLD1Q96LR9 279 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 GDF15Q99988 308 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 CCM2LQ9NUG4 571 aaPredicted RBP18.99■□□□□ 0.63
HDAC1-201ENST00000373548 ARMC1Q9NVT9 282 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 VAPAQ9P0L0 249 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 TMED5Q9Y3A6 229 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 H0YIV9 168 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 K7EQS6 105 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 DFNA5O60443 496 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 PCDH8O95206 1070 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 NCK1P16333 377 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 ACADLP28330 430 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 HTR1EP28566 365 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 HNF4AP41235 474 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 KIR2DL1P43626 348 aaPredicted RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 SEC13P55735 322 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 PLOD1Q02809 727 aaPredicted RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 CSTF3Q12996 717 aaKnown RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 FXNQ16595 210 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 DOK6Q6PKX4 331 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 HDDC3Q8N4P3 179 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 GOLM1Q8NBJ4 401 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 GATA6Q92908 595 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 TSSK3Q96PN8 268 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 BTBD9Q96Q07 612 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 EFHD1Q9BUP0 239 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 LGR4Q9BXB1 951 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 DPEP2Q9H4A9 486 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 NUMA1Q14980 2115 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 DHRS12A0PJE2 317 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 RNASEH1O60930 286 aaKnown RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 ADH1BP00325 375 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 C5AR1P21730 350 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 MAPK1P28482 360 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 TIE1P35590 1138 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 OR4D2P58180 307 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 TBPL1P62380 186 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 PHC1P78364 1004 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 MRPS35P82673 323 aaKnown RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 CDK3Q00526 305 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 HMBOX1Q6NT76 420 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 SYTL1Q8IYJ3 562 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 FCRL1Q96LA6 429 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 OR52E6Q96RD3 313 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 NR1H4Q96RI1 486 aaPredicted RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 MTERF1Q99551 399 aaKnown RBP18.98■□□□□ 0.63
HDAC1-201ENST00000373548 SEMA6AQ9H2E6 1030 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 PIF1Q9H611 641 aa18.98■□□□□ 0.63
HDAC1-201ENST00000373548 A0A1W2PP55 124 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 TIPRLO75663 272 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 ACPPP15309 386 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SOX11P35716 441 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 INPP5AQ14642 412 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 LMNTD1Q8N9Z9 388 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SPDYE1Q8NFV5 336 aaPredicted RBP18.97■□□□□ 0.63
HDAC1-201ENST00000373548 OR8J3Q8NGG0 315 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 OR9A1PQ8NGU1 263 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 NEIL2Q969S2 332 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 ZDHHC5Q9C0B5 715 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 OR52A5Q9H2C5 316 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SPATA6Q9NWH7 488 aaPredicted RBP18.97■□□□□ 0.63
HDAC1-201ENST00000373548 PCM1Q15154 2024 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 TCRBV5S2A0A599 114 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 CCDC85CA6NKD9 419 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 OXTRP30559 389 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 TNFRSF4P43489 277 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 DDX39BQ13838 428 aaKnown RBP18.97■□□□□ 0.63
HDAC1-201ENST00000373548 E2F2Q14209 437 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 ADNP2Q6IQ32 1131 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 NOXRED1Q6NXP6 359 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SLCO4C1Q6ZQN7 724 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 AMIGO2Q86SJ2 522 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 MSRB3Q8IXL7 192 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 ADGRG5Q8IZF4 528 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 FAM9CQ8IZT9 166 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 ABHD8Q96I13 439 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 EGLN2Q96KS0 407 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 RIPOR3Q96MK2 946 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SGK2Q9HBY8 427 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 GPRC5BQ9NZH0 403 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 SLC23A2Q9UGH3 650 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 PPT2Q9UMR5 302 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 KCNE2Q9Y6J6 123 aa18.97■□□□□ 0.63
HDAC1-201ENST00000373548 HRH2P25021 359 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 CAPN13Q6MZZ7 669 aaPredicted RBP18.96■□□□□ 0.63
HDAC1-201ENST00000373548 KIAA1211LQ6NV74 962 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 RIMKLAQ8IXN7 391 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 LRRC56Q8IYG6 542 aaPredicted RBP18.96■□□□□ 0.63
HDAC1-201ENST00000373548 SGPP1Q9BX95 441 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 MBNL1Q9NR56 388 aaKnown RBP18.96■□□□□ 0.63
HDAC1-201ENST00000373548 SLC25A37Q9NYZ2 338 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 VPS29Q9UBQ0 182 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 AURKCQ9UQB9 309 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 SH2B3Q9UQQ2 575 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 PCDHB3Q9Y5E6 796 aa18.96■□□□□ 0.63
HDAC1-201ENST00000373548 VGLL3A8MV65 326 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 NPPBP16860 134 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 FOLH1Q04609 750 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms