RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 MMP20O60882 483 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PMS2P3Q13401 168 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CXorf40AQ8TE69 158 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MYRFLQ96LU7 910 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 YIPF4Q9BSR8 244 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 GPRC5BQ9NZH0 403 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DLGAP4Q9Y2H0 992 aa17.21■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FGF4P08620 206 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ZNF26P17031 533 aaPredicted RBP17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PPM1AP35813 382 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CTSKP43235 329 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 SLBPQ14493 270 aaKnown RBP eCLIP17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PDCD4Q53EL6 469 aaKnown RBP17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CMPK2Q5EBM0 449 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 AGTRAPQ6RW13 159 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PELI3Q8N2H9 469 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 METTL25Q8N6Q8 603 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 OSBPL6Q9BZF3 934 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 POPDC3Q9HBV1 291 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ACSL6Q9UKU0 697 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 FZD4Q9ULV1 537 aa17.21■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CYP7B1O75881 506 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ALPPL2P10696 532 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TACR1P25103 407 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PCSK6P29122 969 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 LSAMPQ13449 338 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 GET4Q7L5D6 327 aaPredicted RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 THOC6Q86W42 341 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 NLNQ9BYT8 704 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ZDHHC7Q9NXF8 308 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CACNA1CQ13936 2221 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PEX11BO96011 259 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PRLP01236 227 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 EIF2B2P49770 351 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ZBED5Q49AG3 693 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DGKKQ5KSL6 1271 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 HMBOX1Q6NT76 420 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PROX1Q92786 737 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TNFRSF11BO00300 401 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 E2F3O00716 465 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PCDH7O60245 1069 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 EEDO75530 441 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 IL12AP29459 219 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DGKGP49619 791 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 RPS13P62277 151 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CYP2A13Q16696 494 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 EGFLAMQ63HQ2 1017 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ANKRD34AQ69YU3 496 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 SMG7Q92540 1137 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 HTRA1Q92743 480 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TDP1Q9NUW8 608 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 SELENONQ9NZV5 590 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 GPSM3Q9Y4H4 160 aa17.2■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DYTNA2CJ06 578 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TGM5O43548 720 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 KLK1P06870 262 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DDX5P17844 614 aaKnown RBP17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TTKP33981 857 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PCYT1AP49585 367 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ATP4BP51164 291 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 RCAN2Q14206 197 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DEPDC1Q5TB30 811 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PXYLP1Q8TE99 480 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TCEAL4Q96EI5 215 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TMEM175Q9BSA9 504 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DEC1Q9P2X7 70 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PCDHB14Q9Y5E9 798 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PTPRFP10586 1907 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 MAP2K4P45985 399 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TEX26Q8N6G2 289 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 FAM86B1Q8N7N1 296 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CCL5P13501 91 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TNNI3P19429 210 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 AGXTP21549 392 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 ALDH3A2P51648 485 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CAP1Q01518 475 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 NOXRED1Q6NXP6 359 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 LIMS2Q7Z4I7 341 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 HM13Q8TCT9 377 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 NETO1Q8TDF5 533 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TPT1P8Q9HAU6 139 aa17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 DUS2Q9NX74 493 aaKnown RBP17.19■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TCRBV3S1A0A5B6 114 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 EBLN1P0CF75 366 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 PRPS2P11908 318 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 HPCAP84074 193 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 MAELQ96JY0 434 aaKnown RBP17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 CHCHD6Q9BRQ6 235 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 TRNAU1APQ9NX07 287 aaKnown RBP17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 LOC100130705A0A1B0GUX0 176 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 C8BP07358 591 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 SRCP12931 536 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 HSD17B1P14061 328 aa17.18■□□□□ 0.34
TRAF3IP1-201ENST00000373327 RUNX1T1Q06455 604 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms