RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SLBPQ14493 270 aaKnown RBP eCLIP11.29□□□□□ -0.6
VCL-202ENST00000372755 CARTPTQ16568 116 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 RALGPS1Q5JS13 557 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 NXPE1Q8N323 547 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GEMIN6Q8WXD5 167 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 CMTM7Q96FZ5 175 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 SLC35A5Q9BS91 424 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 TRPV4Q9HBA0 871 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 FLRT1Q9NZU1 646 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 POFUT2Q9Y2G5 429 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 EDNRAP25101 427 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SLC6A9P48067 706 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 HADHBP55084 474 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 EIF2S3LQ2VIR3 472 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PRR23BQ6ZRT6 265 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PLA2G15Q8NCC3 412 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 ADAM7Q9H2U9 754 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 MAU2Q9Y6X3 613 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ENTPD6O75354 484 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 RCBTB2O95199 551 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CYP11A1P05108 521 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SNHG28P0DPA3 235 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 GADD45AP24522 165 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PLGLB1Q02325 96 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 KIAA1161Q6NSJ0 714 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 TSTD1Q8NFU3 115 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 NCSTNQ92542 709 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 MALT1Q9UDY8 824 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 KIAA1210Q9ULL0 1709 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 MYBPHLA2RUH7 354 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PRKCHP24723 683 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PTGIRP43119 386 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 AQP4P55087 323 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 DAG1Q14118 895 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PRAMEF14Q5SWL7 426 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 OGFOD2Q6N063 350 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 OR8H3Q8N146 312 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ADAD1Q96M93 576 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 TBX5Q99593 518 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CCM2Q9BSQ5 444 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ZSCAN5AQ9BUG6 496 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SUV39H2Q9H5I1 410 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 USP29Q9HBJ7 922 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CRTAC1Q9NQ79 661 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 POMPQ9Y244 141 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ZNF670-ZNF695F2Z2N8 137 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ACOX3O15254 700 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 PRMT2P55345 433 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 HFE2Q6ZVN8 426 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 GALNT15Q8N3T1 639 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 TLCD1Q96CP7 247 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 MLXQ9UH92 298 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 FZD4Q9ULV1 537 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 H6PDO95479 791 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 TNFP01375 233 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 SMPD1P17405 629 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 MAGEA2P43356 314 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 RAB15P59190 212 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CHAF1BQ13112 559 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 EIF5AL1Q6IS14 154 aaKnown RBP11.28□□□□□ -0.6
VCL-202ENST00000372755 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ENPP7Q6UWV6 458 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 AKAP1Q92667 903 aaKnown RBP eCLIP11.28□□□□□ -0.65e-7■■□□□ 14.2
VCL-202ENST00000372755 CYP2S1Q96SQ9 504 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
VCL-202ENST00000372755 CBSLP0DN79 551 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 FMO3P31513 532 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 CBSP35520 551 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 OR2B6P58173 313 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 SNTA1Q13424 505 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 UBXN2BQ14CS0 331 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 PACRGLQ8N7B6 248 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 PCDH19Q8TAB3 1148 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 TFAP2BQ92481 460 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 MND1Q9BWT6 205 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.6
VCL-202ENST00000372755 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 TNFRSF10DQ9UBN6 386 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 CYTH4Q9UIA0 394 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 MST1RQ04912 1400 aa11.27□□□□□ -0.6
VCL-202ENST00000372755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 ZNF878C9JN71 531 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 NPIPA5E9PKD4 350 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms