RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 FPR1P21462 350 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 LIPAP38571 399 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 CLK1P49759 484 aaKnown RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 NEK2P51955 445 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 ARHGDIAP52565 204 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 MVKQ03426 396 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 ARHGEF7Q14155 803 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 ATXN7L2Q5T6C5 722 aaPredicted RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 RNF219Q5W0B1 726 aaPredicted RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 SAPCD2Q86UD0 394 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 CHCHD4Q8N4Q1 142 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 EGLN2Q96KS0 407 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.95■□□□□ 0.14
SDC4-201ENST00000372733 VWA8A3KMH1 1905 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 MTMR11A4FU01 709 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 GAPDHSO14556 408 aaPredicted RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 RFXANKO14593 260 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 DUSP11O75319 330 aaKnown RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 GJB5O95377 273 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 CD160O95971 181 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 EBLN1P0CF75 366 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 ZNF7P17097 686 aaPredicted RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 DNAJA1P31689 397 aaKnown RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 CLDN8P56748 225 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 KIAA1614Q5VZ46 1190 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 OR4F3Q6IEY1 312 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 APH1BQ8WW43 257 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 NTMT1Q9BV86 223 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 NACA2Q9H009 215 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 MIR1-1HGQ9H1L0 117 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 CCNB1IP1Q9NPC3 277 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 LATS2Q9NRM7 1088 aa15.95■□□□□ 0.14
SDC4-201ENST00000372733 THG1LQ9NWX6 298 aaKnown RBP15.95■□□□□ 0.14
SDC4-201ENST00000372733 GOLGA8CPA6NN73 597 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 FABP3P05413 133 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 MAGP20916 626 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 NCEH1Q6PIU2 408 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 RSPO2Q6UXX9 243 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 RNF19BQ6ZMZ0 732 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 Q6ZPB1 254 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 ZBTB2Q8N680 514 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 DNASE1L2Q92874 299 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 CEP295NLQ96MC4 621 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 AASDHPPTQ9NRN7 309 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 VPS4AQ9UN37 437 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 ATP11BQ9Y2G3 1177 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 ILVBLA1L0T0 632 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 NBNO60934 754 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 CLDN11O75508 207 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SPNP16150 400 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SDC1P18827 310 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 EPORP19235 508 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 DGKAP23743 735 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SLC11A2P49281 568 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 NKX2-5P52952 324 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 FADDQ13158 208 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 ZNF177Q13360 481 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 ATAD3BQ5T9A4 648 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 DEPDC1Q5TB30 811 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 STEAP3Q658P3 488 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 FAM83FQ8NEG4 500 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 OR6K2Q8NGY2 324 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 UBTD2Q8WUN7 234 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 HSH2DQ96JZ2 352 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SIGLEC11Q96RL6 698 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SLX1AQ9BQ83 275 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 DPH2Q9BQC3 489 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 C6orf62Q9GZU0 229 aaPredicted RBP15.94■□□□□ 0.14
SDC4-201ENST00000372733 ASB8Q9H765 288 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 LHX3Q9UBR4 397 aa15.94■□□□□ 0.14
SDC4-201ENST00000372733 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
SDC4-201ENST00000372733 DLGAP3O95886 979 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 KLKB1P03952 638 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 ZDHHC11BP0C7U3 371 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 PCYT1AP49585 367 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 DUSP4Q13115 394 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 RNF165Q6ZSG1 346 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
SDC4-201ENST00000372733 RBFAQ8N0V3 343 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 POC5Q8NA72 575 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 SELENOMQ8WWX9 145 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 SLC38A4Q969I6 547 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 TBC1D20Q96BZ9 403 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 ERVK-11Q9UQG0 969 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 ZNF451Q9Y4E5 1061 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 METTL15A6NJ78 407 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 CLDN24A6NM45 220 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 STK16O75716 305 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 KCNK2O95069 426 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 CLDN9O95484 217 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 KRT6AP02538 564 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 KRT6BP04259 564 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 DBTP11182 482 aaKnown RBP15.93■□□□□ 0.14
SDC4-201ENST00000372733 GADD45AP24522 165 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 HMGCLP35914 325 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 KRT6CP48668 564 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 RPP38P78345 283 aaKnown RBP15.93■□□□□ 0.14
SDC4-201ENST00000372733 FAM189BP81408 668 aa15.93■□□□□ 0.14
SDC4-201ENST00000372733 CDC20Q12834 499 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms