RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 ULK2Q8IYT8 1036 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 DEFB107AQ8IZN7 70 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 DSELQ8IZU8 1212 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 TSPEARQ8WU66 669 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 NEIL2Q969S2 332 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 MRPL1Q9BYD6 325 aaKnown RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 ACPTQ9BZG2 426 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 CCDC177Q9NQR7 707 aaPredicted RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 ASIC5Q9NY37 505 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 NOP53Q9NZM5 478 aaKnown RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 SPATA7Q9P0W8 599 aa17.47■□□□□ 0.39
CD40-202ENST00000372285 TDRKHQ9Y2W6 561 aaKnown RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.47■□□□□ 0.39
CD40-202ENST00000372285 FBP2O00757 339 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 NME5P56597 212 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 CTBSQ01459 385 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 HMGCS1Q01581 520 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 UAP1L1Q3KQV9 507 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 RFTN2Q52LD8 501 aaPredicted RBP17.46■□□□□ 0.39
CD40-202ENST00000372285 WASHC2DQ5SRD0 308 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 PGM2L1Q6PCE3 622 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 BLOC1S3Q6QNY0 202 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 ABI3BPQ7Z7G0 1075 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 ZFAND4Q86XD8 727 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 SIX5Q8N196 739 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 WDR20Q8TBZ3 569 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 MTFMTQ96DP5 389 aaKnown RBP17.46■□□□□ 0.39
CD40-202ENST00000372285 PDXPQ96GD0 296 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 C12orf66Q96MD2 445 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 MENTQ9BUN1 341 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 EHD1Q9H4M9 534 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 LRTM1Q9HBL6 345 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 C1orf109Q9NX04 203 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 PLAGL1Q9UM63 463 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 DYRK1BQ9Y463 629 aa17.46■□□□□ 0.39
CD40-202ENST00000372285 ZNF839A8K0R7 811 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 BBIP1A8MTZ0 92 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 NRP2O60462 931 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 RSL1D1O76021 490 aaKnown RBP17.45■□□□□ 0.38
CD40-202ENST00000372285 SLC2A4P14672 509 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 NEK2P51955 445 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 THOP1P52888 689 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
CD40-202ENST00000372285 PRKG2Q13237 762 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 IL23RQ5VWK5 629 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 LCTLQ6UWM7 567 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 PARP9Q8IXQ6 854 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 BIRC7Q96CA5 298 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 IL17FQ96PD4 163 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 FERD3LQ96RJ6 166 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 NPAS2Q99743 824 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 GPR174Q9BXC1 333 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 PCDHGA11Q9Y5H2 935 aa17.45■□□□□ 0.38
CD40-202ENST00000372285 SEC22BO75396 215 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 SLC22A3O75751 556 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 RABIFP47224 123 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 ZFP36L2P47974 494 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 RPL38P63173 70 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 ART3Q13508 389 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 LRP8Q14114 963 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CLCA4Q14CN2 919 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 ATG9BQ674R7 924 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 REP15Q6BDI9 236 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 DUS1LQ6P1R4 473 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 SUSD1Q6UWL2 747 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 HACD2Q6Y1H2 254 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 Q6ZSR6 202 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 UBALD2Q8IYN6 164 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 PGAM4Q8N0Y7 254 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 LMNTD1Q8N9Z9 388 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CLDN23Q96B33 292 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CLPTM1LQ96KA5 538 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CAMK1GQ96NX5 476 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 HAUS8Q9BT25 410 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 RASSF4Q9H2L5 321 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CHRDQ9H2X0 955 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 DENND2DQ9H6A0 471 aaPredicted RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 MVB12BQ9H7P6 319 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 SLC52A3Q9NQ40 469 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 PRPF19Q9UMS4 504 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 EIF3LQ9Y262 564 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 NDUFAF1Q9Y375 327 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 PLXND1Q9Y4D7 1925 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 FANCMQ8IYD8 2048 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 IGHV1OR15-9A0A0B4J2B8 117 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 ANKRD28O15084 1053 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 C1GALT1C1LP0DN25 315 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 G6PDP11413 515 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 HSD3B1P14060 373 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 HSD3B2P26439 372 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 UFM1P61960 85 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 TBL3Q12788 808 aaKnown RBP17.44■□□□□ 0.38
CD40-202ENST00000372285 KIAA0040Q15053 153 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 MMEL1Q495T6 779 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 PRAMEF14Q5SWL7 426 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 PRAMEF13Q5VWM6 474 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 CYP20A1Q6UW02 462 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 WASH2PQ6VEQ5 465 aa17.44■□□□□ 0.38
CD40-202ENST00000372285 TSACCQ96A04 125 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms