RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 C9orf64Q5T6V5 341 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RALGPS2Q86X27 583 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 BRINP2Q9C0B6 783 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR1F1O43749 312 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR7A10O76100 309 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 TRBC1P01850 177 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF24P17028 368 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ACADVLP49748 655 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SMG9Q9H0W8 520 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 OSER1Q9NX31 292 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PDE10AQ9Y233 779 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SCELO95171 688 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 H6PDO95479 791 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 TIMP1P01033 207 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 IFNA7P01567 189 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HSD3B1P14060 373 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RPL26P61254 145 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ANKDD1AQ495B1 522 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 DRICH1Q6PGQ1 229 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 CARS2Q9HA77 564 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 EXD2Q9NVH0 621 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 N6AMT1Q9Y5N5 214 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HCRTO43612 131 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 UGT2B17O75795 530 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 TGM6O95932 706 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PSMA1P25786 263 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF132P52740 706 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 CYP1B1Q16678 543 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PIK3R6Q5UE93 754 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SMOQ99835 787 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRTM1Q9HBL6 345 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 DHRS7Q9Y394 339 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 IQCF5A8MTL0 148 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 MPZL2O60487 215 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 RPL4P36578 427 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 SEMG2Q02383 582 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 PRKCGP05129 697 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 AVPR1BP47901 424 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TM4SF4P48230 202 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 GNG2P59768 71 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 AJAP1Q9UKB5 411 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 H0YJX3 145 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC7A4O43246 635 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 AIREO43918 545 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 NPHS1O60500 1241 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TCEA3O75764 348 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR5F1O95221 314 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 MBP02144 154 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TAS2R41P59536 307 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 IRF5Q13568 498 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TMPRSS11AQ6ZMR5 421 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 UNC5BQ8IZJ1 945 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF366Q8N895 744 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 TAMM41Q96BW9 452 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 COQ10BQ9H8M1 238 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 AP2A2O94973 939 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 VIPR1P32241 457 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 STXBP1P61764 594 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 GTF2H2Q13888 395 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 PITRM1Q5JRX3 1037 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 GTF2H2CQ6P1K8 395 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 Q6ZVU0 165 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 SMG8Q8ND04 991 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 RAD51AP1Q96B01 352 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 GTPBP2Q9BX10 602 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 MALT1Q9UDY8 824 aa13.03□□□□□ -0.32
RAPGEF1-201ENST00000372189 RHOP08100 348 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 LMAN2LQ9H0V9 348 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 HLA-DQB2P05538 268 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 NT5EP21589 574 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 ACTR1BP42025 376 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 HSPA7P48741 367 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms