RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 WASP42768 502 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 KRT6CP48668 564 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 RPIAP49247 311 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 HTR6P50406 440 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 ZNF33BQ06732 778 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 TLR1Q15399 786 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 ZNF805Q5CZA5 627 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 TRMT11Q7Z4G4 463 aaKnown RBP13.71□□□□□ -0.22
LDB3-204ENST00000372066 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 MARVELD2Q8N4S9 558 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 DEFB119Q8N690 84 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 DEFB124Q8NES8 71 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 TMEM125Q96AQ2 219 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 HIST1H2AHQ96KK5 128 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 CDK15Q96Q40 435 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 VPS35Q96QK1 796 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 HIST1H2AJQ99878 128 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 H2AFJQ9BTM1 129 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 PCDHAC1Q9H158 963 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 C8orf4Q9NR00 106 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 IL36AQ9UHA7 158 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 SLC27A6Q9Y2P4 619 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 AP3M1Q9Y2T2 418 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 CCL27Q9Y4X3 112 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 MUC22E2RYF6 1773 aaPredicted RBP13.7□□□□□ -0.22
LDB3-204ENST00000372066 AP1G1O43747 822 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 ULK1O75385 1050 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 RNASEH2AO75792 299 aaKnown RBP13.7□□□□□ -0.22
LDB3-204ENST00000372066 CLDN9O95484 217 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 GPIP06744 558 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 UMPSP11172 480 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 DGKGP49619 791 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 UFM1P61960 85 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 AP5B1Q2VPB7 878 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 LDLRAP1Q5SW96 308 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 CYP20A1Q6UW02 462 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 SCIMPQ6UWF3 145 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 UBE2R2Q712K3 238 aaPredicted RBP13.7□□□□□ -0.22
LDB3-204ENST00000372066 NRSN1Q8IZ57 195 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 LILRA2Q8N149 483 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 DNAJB8Q8NHS0 232 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 USP7Q93009 1102 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 C1orf50Q9BV19 199 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 CMTM6Q9NX76 183 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 ARL15Q9NXU5 204 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
LDB3-204ENST00000372066 SNX13Q9Y5W8 968 aa13.7□□□□□ -0.22
LDB3-204ENST00000372066 SERTM1A2A2V5 107 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ASPDHA6ND91 283 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 NPIPB8E9PQR5 432 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 HNRNPRO43390 633 aaKnown RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 LEFTY1O75610 366 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 CFIP05156 583 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 FCGR1AP12314 374 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ACPPP15309 386 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ENGP17813 658 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ITPKAP23677 461 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 PSMA4P25789 261 aaKnown RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 HTR1EP28566 365 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 ST8SIA6P61647 398 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 RPL6Q02878 288 aaKnown RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 ABRAXAS2Q15018 415 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 FXNQ16595 210 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 IMPG1Q17R60 797 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ZNF284Q2VY69 593 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 C18orf21Q32NC0 220 aaPredicted RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 HENMT1Q5T8I9 393 aaKnown RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 TMEM215Q68D42 235 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 SDE2Q6IQ49 451 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ERAP2Q6P179 960 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 PROSER1Q86XN7 944 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 HID1Q8IV36 788 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 RASGRP3Q8IV61 690 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 AADATQ8N5Z0 425 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 TERB1Q8NA31 727 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 SLC45A3Q96JT2 553 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 SLC39A3Q9BRY0 314 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 FAM192AQ9GZU8 254 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ALG2Q9H553 416 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 CCM2LQ9NUG4 571 aaPredicted RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 PILRBQ9UKJ0 227 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 SNX6Q9UNH7 406 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 PDE10AQ9Y233 779 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
LDB3-204ENST00000372066 EML5Q05BV3 1969 aa13.69□□□□□ -0.22
LDB3-204ENST00000372066 GFYI3L273 518 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 MANBAO00462 879 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms