RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OR4K3Q96R72 315 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF416Q9BWM5 594 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 IFT52Q9Y366 437 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 EIF1AYO14602 144 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 GMDSO60547 372 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 CERS1P27544 350 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 HNRNPH3P31942 346 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 EIF1AXP47813 144 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ETV1P50549 477 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 OR2S2Q9NQN1 319 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 SACM1LQ9NTJ5 587 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ACTR10Q9NZ32 417 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 OR6C65A6NJZ3 312 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 E9PI62 339 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 HOXA2O43364 376 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 PRPS2P11908 318 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 CTSEP14091 401 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 STT3AP46977 705 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 GK2Q14410 553 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 TRAM1Q15629 374 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 FNDC3BQ53EP0 1204 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 IQCHQ86VS3 1027 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 BRINP2Q9C0B6 783 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 C14orf119Q9NWQ9 140 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ELOA3DA6NLF2 546 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 HNRNPFP52597 415 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ELOA3BQ3SY89 546 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ELOA3Q8NG57 546 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 OR14A2Q96R54 314 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 MRPL42Q9Y6G3 142 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ARPC2O15144 300 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 MAGEA3P43357 314 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ZPBP2Q6X784 338 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 TM9SF2Q99805 663 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 NUDT4Q9NZJ9 180 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 FXYD6P3P58550 94 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 SNRPD2P62316 118 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 PYROXD2Q8N2H3 581 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 GSTM3P21266 225 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 MAGEB1P43366 347 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 HERV-K104P61576 105 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 NUP54Q7Z3B4 507 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 SLC15A3Q8IY34 581 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 LINC00471Q8N535 108 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 CLCA3PQ9Y6N3 262 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 TLX3O43711 291 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 KLF1Q13351 362 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ALG3Q92685 438 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 THRSPQ92748 146 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 TWNKQ96RR1 684 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 FUOMA2VDF0 154 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 EEF1E1O43324 174 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ARP10275 920 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 CHRNB1P11230 501 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 THG1LQ9NWX6 298 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 KDM6BO15054 1643 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 KIAA0100Q14667 2235 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 LCHNA4D1U4 455 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 HSPB3Q12988 150 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 DPPA2Q7Z7J5 298 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 PARGQ86W56 976 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 MRPL41Q8IXM3 137 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 TMEM199Q8N511 208 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ASF1BQ9NVP2 202 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 CNOT11Q9UKZ1 510 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 GPR89AB7ZAQ6 455 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 SNAPINO95295 136 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 CSTBP04080 98 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 GPR89BP0CG08 455 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 AMD1P17707 334 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 SFT2D3Q587I9 215 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 TMEM236Q5W0B7 351 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 BANPQ8N9N5 519 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 SECISBP2Q96T21 854 aaKnown RBP14.94□□□□□ -0.02
COL5A1-201ENST00000371817 A0A0G2JMP0 313 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 UBE2Q2LH0YL09 131 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 PIP5K1BO14986 540 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 SLC35G4P0C7Q5 338 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 HSD11B1P28845 292 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 NXPE1Q8N323 547 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 OR4M2Q8NGB6 313 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 CXorf40BQ96DE9 158 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
COL5A1-201ENST00000371817 PIRTP0C851 137 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 PPP2R2DQ66LE6 453 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ENDOVQ8N8Q3 282 aaKnown RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 OR2AJ1Q8NGZ0 328 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 NEIL3Q8TAT5 605 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 FRZBQ92765 325 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 RIPOR3Q96MK2 946 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 EFCAB6Q5THR3 1501 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 DPY19L1Q2PZI1 675 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms