RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 SUSD1Q6UWL2 747 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 ZCCHC23Q6ZST2 131 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 RPS27LQ71UM5 84 aaKnown RBP10.13□□□□□ -0.79
TCTN3-202ENST00000371209 AMIGO1Q86WK6 493 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 KLHDC8AQ8IYD2 350 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 SYTL1Q8IYJ3 562 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 ADGRF3Q8IZF5 1079 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 TCAIMQ8N3R3 496 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 AVL9Q8NBF6 648 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 OR2L8Q8NGY9 312 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 OR56A3Q8NH54 315 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 HMGCLL1Q8TB92 370 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 ATL1Q8WXF7 558 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 SEC16BQ96JE7 1060 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 PITPNM3Q9BZ71 974 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 CD244Q9BZW8 370 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 TWSG1Q9GZX9 223 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 SRMSQ9H3Y6 488 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 UCK1Q9HA47 277 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 INTS9Q9NV88 658 aaKnown RBP10.13□□□□□ -0.79
TCTN3-202ENST00000371209 SPHK1Q9NYA1 384 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 LNPEPQ9UIQ6 1025 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 ANKRD12Q6UB98 2062 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 DMXL1Q9Y485 3027 aa10.13□□□□□ -0.79
TCTN3-202ENST00000371209 LILRA5A6NI73 299 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RHPN2P1A8MT19 583 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 BTN3A3O00478 584 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 E2F3O00716 465 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SH3BP5O60239 455 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 TRIM13O60858 407 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RPS17P08708 135 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CHRM5P08912 532 aaPredicted RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 IMPDH1P20839 514 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 BGNP21810 368 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 HSD17B2P37059 387 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CCR10P46092 362 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SCTRP47872 440 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SEC24CP53992 1094 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 NAGLUP54802 743 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 OR1D5P58170 312 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 HERVK_113P63132 956 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 BIRC2Q13490 618 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 NR1D2Q14995 579 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 PCBP2Q15366 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 UNC50Q53HI1 259 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 PERM1Q5SV97 790 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 LIPMQ5VYY2 423 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 NUDCD3Q8IVD9 361 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SLC22A9Q8IVM8 553 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 NAXDQ8IW45 347 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CCDC197Q8NCU1 140 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 OR6Y1Q8NGX8 325 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SETD7Q8WTS6 366 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RSC1A1Q92681 617 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CCDC74AQ96AQ1 378 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SH3KBP1Q96B97 665 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CCDC126Q96EE4 140 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 L3HYPDHQ96EM0 354 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 MED8Q96G25 268 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RSRC1Q96IZ7 334 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 NSUN5Q96P11 429 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SLC38A3Q99624 504 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 GATA5Q9BWX5 397 aaPredicted RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SGPP1Q9BX95 441 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 RAB11FIP5Q9BXF6 653 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 ERVK-6Q9BXR3 956 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 STN1Q9H668 368 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 INTS7Q9NVH2 962 aaKnown RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 OR6C2Q9NZP2 312 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 PCTPQ9UKL6 214 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 SH2B3Q9UQQ2 575 aa10.12□□□□□ -0.79
TCTN3-202ENST00000371209 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
TCTN3-202ENST00000371209 CPED1A4D0V7 1026 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 EME2A4GXA9 379 aaPredicted RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 OR6C74A6NCV1 312 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 LCE2BO14633 110 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 B4GAT1O43505 415 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 PRICKLE3O43900 615 aaPredicted RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 KDM1AO60341 852 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 STK16O75716 305 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 UBXN7O94888 489 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 WDR47O94967 919 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 CKMT1AP12532 417 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 TYRP1P17643 537 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 TSPAN8P19075 237 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 EPORP19235 508 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 POLR2CP19387 275 aaPredicted RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 PSMB5P28074 263 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 ARRB2P32121 409 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 PPP1CAP62136 330 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 YBX1P67809 324 aaKnown RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 TSTA3Q13630 321 aaPredicted RBP10.11□□□□□ -0.79
TCTN3-202ENST00000371209 CHI3L2Q15782 390 aa10.11□□□□□ -0.79
TCTN3-202ENST00000371209 INAVAQ3KP66 663 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms