RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 NANOGQ9H9S0 305 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 TM9SF3Q9HD45 589 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 GRIP1Q9Y3R0 1128 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 ATRNL1Q5VV63 1379 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 PAPSS2O95340 614 aaPredicted RBP16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 NAPRTQ6XQN6 538 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 KLHL36Q8N4N3 616 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 TSEN15Q8WW01 171 aaKnown RBP16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 AHCYL2Q96HN2 611 aaKnown RBP16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FUBP3Q96I24 572 aaKnown RBP eCLIP16.74■□□□□ 0.271e-10■■■■□ 25.7
PTP4A1-201ENST00000370651 HSH2DQ96JZ2 352 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 MAPKAP1Q9BPZ7 522 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC35A5Q9BS91 424 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FBP2O00757 339 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 ITGA3P26006 1051 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 HTR1BP28222 390 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 C6orf141Q5SZD1 244 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 CADM2Q8N3J6 435 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FIBCD1Q8N539 461 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 PLD4Q96BZ4 506 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 OR1F1O43749 312 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 MTRF1O75570 445 aaKnown RBP16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 DNAJB5O75953 348 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 SMPD1P17405 629 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 SP2Q02086 613 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 MAB21L1Q13394 359 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FAM91A1Q658Y4 838 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FBXL22Q6P050 247 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 LINGO2Q7L985 606 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 GOLGA7Q7Z5G4 137 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 PARGQ86W56 976 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 MARCH9Q86YJ5 346 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 FAM110BQ8TC76 370 aa16.74■□□□□ 0.27
PTP4A1-201ENST00000370651 ISPDA4D126 451 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 T-ENOLP0DO92 83 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 PEPDP12955 493 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CRISP3P54108 245 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CCL23P55773 120 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RUNDC3AQ59EK9 446 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TMEM199Q8N511 208 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MRM3Q9HC36 420 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 PRORSD1PA6NEY8 169 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 ITPKBP27987 946 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 STC1P52823 247 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TMEM220Q6QAJ8 160 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TMC8Q8IU68 726 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RBM12BQ8IXT5 1001 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 FRMD6Q96NE9 622 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 FCRL3Q96P31 734 aaPredicted RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MND1Q9BWT6 205 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 KCTD3Q9Y597 815 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 AKAP8O43823 692 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 PRKCGP05129 697 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 ZNF45Q02386 682 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 LAPTM4AQ15012 233 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 KIAA1161Q6NSJ0 714 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CES5AQ6NT32 575 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 ZNF563Q8TA94 476 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MYOCQ99972 504 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MED11Q9P086 117 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TRBC2A0A5B9 178 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CACNB4O00305 520 aaPredicted RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CDRT1O95170 752 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 GLUD1P00367 558 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 GSTT2BP0CG30 244 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CLK3P49761 638 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 KHKP50053 298 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 HLCSP50747 726 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 DSTNP60981 165 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RPS3AP61247 264 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TMEM236Q5W0B7 351 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 KLHL35Q6PF15 583 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 CYS1Q717R9 158 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 TRUB1Q8WWH5 349 aaKnown RBP16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 PKP4Q99569 1192 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 OSER1Q9NX31 292 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
PTP4A1-201ENST00000370651 MANBAO00462 879 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 PI15O43692 258 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 FOXD2O60548 495 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 SNNO75324 88 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 ATP13A5Q4VNC0 1218 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 LRRC70Q7Z2Q7 622 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 CAMK1GQ96NX5 476 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 PTPN18Q99952 460 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 PHPT1Q9NRX4 125 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 FBXW2Q9UKT8 454 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 CNOT11Q9UKZ1 510 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms