RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 NEK10Q6ZWH5 1172 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 PPP1R32Q7Z5V6 425 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 LDB1Q86U70 411 aaPredicted RBP15.47■□□□□ 0.07
VMA21-202ENST00000370361 LMNTD2Q8IXW0 634 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 ZADH2Q8N4Q0 377 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 OR2L3Q8NG85 312 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 LPGAT1Q92604 370 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 MVB12AQ96EY5 273 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 BIRC8Q96P09 236 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
VMA21-202ENST00000370361 XAB2Q9HCS7 855 aaKnown RBP15.47■□□□□ 0.07
VMA21-202ENST00000370361 E5RI56 91 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 PRPF4O43172 522 aaKnown RBP eCLIP15.46■□□□□ 0.07
VMA21-202ENST00000370361 CEP104O60308 925 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 VPS26AO75436 327 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 AGFG2O95081 481 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 CCNDBP1O95273 360 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 DDAH2O95865 285 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 CATP04040 527 aaKnown RBP15.46■□□□□ 0.07
VMA21-202ENST00000370361 UMODP07911 640 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 ERGP11308 486 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 CARSP49589 748 aaKnown RBP15.46■□□□□ 0.07
VMA21-202ENST00000370361 RELAQ04206 551 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 FCRL6Q6DN72 434 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 RNF44Q7L0R7 432 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 Q8NA96 180 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 SMPDL3AQ92484 453 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 MFSD3Q96ES6 412 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 SYBUQ9NX95 663 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 CDC14AQ9UNH5 594 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 COMMD10Q9Y6G5 202 aa15.46■□□□□ 0.07
VMA21-202ENST00000370361 USP9YO00507 2555 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 SPENQ96T58 3664 aaKnown RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 FAM237BA0A1B0GVD1 139 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 TXNDC9O14530 226 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ERVK-10P10266 1014 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ENO3P13929 434 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 PKMP14618 531 aaKnown RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 CHRM3P20309 590 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 GNLYP22749 145 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 KCNJ11Q14654 390 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 NKG7Q16617 165 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 MUM1Q2TAK8 710 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 CTSL3PQ5NE16 218 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 PRAMEF13Q5VWM6 474 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 CNSTQ6PJW8 725 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 TAX1BP1Q86VP1 789 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 CILP2Q8IUL8 1156 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 FBXO15Q8NCQ5 510 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 MCUQ8NE86 351 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 OR2A1Q8NGT9 310 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 OR9A1PQ8NGU1 263 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 GABPB2Q8TAK5 448 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 SPSB2Q99619 263 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ZFYVE21Q9BQ24 234 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ILKAPQ9H0C8 392 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 CCDC68Q9H2F9 335 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ZNF552Q9H707 407 aaPredicted RBP15.45■□□□□ 0.06
VMA21-202ENST00000370361 SLC22A11Q9NSA0 550 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 SHANK1Q9Y566 2161 aa15.45■□□□□ 0.06
VMA21-202ENST00000370361 ESPL1Q14674 2120 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 USP9XQ93008 2570 aaPredicted RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 HYKKA2RU49 373 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 OR2A25A4D2G3 310 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 SDR42E2A6NKP2 422 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 VSTM2BA6NLU5 285 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 MYO1CO00159 1063 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 EIF3FO00303 357 aaPredicted RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 CNOT3O75175 753 aaKnown RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 PSIP1O75475 530 aaKnown RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 FMO4P31512 558 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 OCA2Q04671 838 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 GPS1Q13098 491 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 SLC9A5Q14940 896 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 TUBB8Q3ZCM7 444 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 WASHC2DQ5SRD0 308 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 AGAP7PQ5VUJ5 663 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 NEPROQ6NW34 567 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 C2orf73Q8N5S3 287 aaPredicted RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 PRELID2Q8N945 189 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 PPP4R1Q8TF05 950 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 SSC4DQ8WTU2 575 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 KCNJ9Q92806 393 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 PBKQ96KB5 322 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 AGAP4Q96P64 663 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 MIPEPQ99797 713 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 ZNF304Q9HCX3 659 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 ZNF282Q9UDV7 671 aaPredicted RBP15.44■□□□□ 0.06
VMA21-202ENST00000370361 FBXL4Q9UKA2 621 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 KLHL20Q9Y2M5 609 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 JRKLQ9Y4A0 524 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 NFS1Q9Y697 457 aa15.44■□□□□ 0.06
VMA21-202ENST00000370361 BLACEA4D250 179 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms