RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BLVRAP53004 296 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PPP5CP53041 499 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SLC25A3Q00325 362 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 EFEMP1Q12805 493 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SLC36A3Q495N2 470 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MBLAC2Q68D91 279 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 DENND5AQ6IQ26 1287 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SLC16A12Q6ZSM3 486 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF767PQ75MW2 155 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ERN2Q76MJ5 926 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 LGI2Q8N0V4 545 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF557Q8N988 423 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 GLIS1Q8NBF1 620 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 OR6Q1Q8NGQ2 317 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ENKURQ8TC29 256 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 FOXJ1Q92949 421 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 USB1Q9BQ65 265 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 TKTL2Q9H0I9 626 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 GMEB2Q9UKD1 530 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PCOLCE2Q9UKZ9 415 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 hCG_1818297A0A087WSY0 165 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SAGE2PA6NJ88 616 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 LEUTXA8MZ59 168 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 M0QYT0 321 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 TOR1BO14657 336 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 APRTP07741 180 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SERPINB1P30740 379 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CCR1P32246 355 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 GRK3P35626 688 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CLCNKAP51800 687 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NXPH1P58417 271 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 COPZ1P61923 177 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 PPP2CBP62714 309 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 PPP2CAP67775 309 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 RELQ04864 619 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CSTF1Q05048 431 aaKnown RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 DPTQ07507 201 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ATAD3CQ5T2N8 411 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 UBE2UQ5VVX9 321 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CES4AQ5XG92 561 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 KRT80Q6KB66 452 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 C16orf46Q6P387 395 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 OGFOD3Q6PK18 319 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 PDIK1LQ8N165 341 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CNTD1Q8N815 330 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 HDAC11Q96DB2 347 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 LRIG1Q96JA1 1093 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MAGED4Q96JG8 741 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 TMEM79Q9BSE2 394 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MAGEH1Q9H213 219 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SGK2Q9HBY8 427 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SLC17A7Q9P2U7 560 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 RAD54BQ9Y620 910 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 A0A1W2PPC4 97 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 TRPC5OSA6NMA1 111 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ATP6V1G2-DDX39BF2Z307 99 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NTN3O00634 580 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF195O14628 629 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 APOL1O14791 398 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 LIASO43766 372 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 BANF1O75531 89 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 UPK1BO75841 260 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SNX4O95219 450 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ADRB1P08588 477 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ATXN1LP0C7T5 689 aaKnown RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ACVRL1P37023 503 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MMP12P39900 470 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NR2C2P49116 596 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ACVR1Q04771 509 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 KDSRQ06136 332 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 KRR1Q13601 381 aaKnown RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SIM2Q14190 667 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF773Q6PK81 442 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 KDELC1Q6UW63 502 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 LYSMD2Q8IV50 215 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 C4orf33Q8N1A6 199 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 BLOC1S5Q8TDH9 187 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NRBF2Q96F24 287 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ST6GAL2Q96JF0 529 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CSPG4P5Q96PW8 444 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF670Q9BS34 389 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SNRNP25Q9BV90 132 aaKnown RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 FAM86C1Q9NVL1 165 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF221Q9UK13 617 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 DTX4Q9Y2E6 619 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 A3GALT2U3KPV4 340 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NEDD8-MDP1E9PL57 170 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 K7ERQ8 282 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 HDAC3O15379 428 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MOCS2O96007 188 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MATN1P21941 496 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 PTGER3P43115 390 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 SUOXP51687 545 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 PRAMEP78395 509 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MORF4L2Q15014 288 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 HIF1AQ16665 826 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms