RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CDKL1Q00532 357 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 C16orf72Q14CZ0 275 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 PTCHD3Q3KNS1 767 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 TMPRSS7Q7RTY8 843 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 LRRC56Q8IYG6 542 aaPredicted RBP13.41□□□□□ -0.26
TPM3-211ENST00000368531 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 DCBLD1Q8N8Z6 715 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 FLVCR1-AS1Q8TAF5 88 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 RHEBL1Q8TAI7 183 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 ATL1Q8WXF7 558 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 SLC22A18Q96BI1 424 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 RHBDF1Q96CC6 855 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 MRPL57Q9BQC6 102 aaKnown RBP13.41□□□□□ -0.26
TPM3-211ENST00000368531 STRADBQ9C0K7 418 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 NUDT4Q9NZJ9 180 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 DMXL1Q9Y485 3027 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 GOLGA6L10A6NI86 522 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 MAP2K7O14733 419 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 WDR47O94967 919 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 GSTA1P08263 222 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 MTHFD2P13995 350 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 ST6GAL1P15907 406 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CMPK1P30085 196 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CCKBRP32239 447 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CCT5P48643 541 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 AGTR2P50052 363 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 SLC18A2Q05940 514 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 KCNAB1Q14722 419 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 SLC5A12Q1EHB4 618 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
TPM3-211ENST00000368531 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CCDC63Q8NA47 563 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 OR2L3Q8NG85 312 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 OR2A1Q8NGT9 310 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 OR56A3Q8NH54 315 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 PHF21BQ96EK2 531 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 SMC6Q96SB8 1091 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 CD180Q99467 661 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 MRPL46Q9H2W6 279 aaKnown RBP13.4□□□□□ -0.26
TPM3-211ENST00000368531 C1GALT1Q9NS00 363 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 INTS7Q9NVH2 962 aaKnown RBP13.4□□□□□ -0.26
TPM3-211ENST00000368531 SOHLH2Q9NX45 425 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 KLK13Q9UKR3 277 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 SLC22A14Q9Y267 594 aa13.4□□□□□ -0.26
TPM3-211ENST00000368531 ADAMTS20P59510 1910 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 A0A0J9YY10 115 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 PMS2P1A4D2B8 440 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 LRRC14BA6NHZ5 514 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 AGPSO00116 658 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 CCNT2O60583 730 aaKnown RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 SMIM24O75264 130 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 HGFP14210 728 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 MAGP20916 626 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 CSTF2P33240 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM3-211ENST00000368531 CRHR1P34998 444 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 GRIA3P42263 894 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 HNMTP50135 292 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 TRA2AQ13595 282 aaKnown RBP eCLIP13.39□□□□□ -0.274e-13■■■■□ 25.8
TPM3-211ENST00000368531 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 ICE2Q659A1 982 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 FIGLAQ6QHK4 219 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 EXOC3L1Q86VI1 746 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 THOC6Q86W42 341 aaKnown RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 FAM129CQ86XR2 697 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 PTGR2Q8N8N7 351 aaPredicted RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 SNX31Q8N9S9 440 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 TRAPPC9Q96Q05 1148 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 TMEM79Q9BSE2 394 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 SGPP1Q9BX95 441 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 TMBIM4Q9HC24 238 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 MRPS30Q9NP92 439 aaKnown RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 OCIAD1Q9NX40 245 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
TPM3-211ENST00000368531 EMCNQ9ULC0 261 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 GRID1Q9ULK0 1009 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
TPM3-211ENST00000368531 CCDC189A1A4V9 331 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 EFCAB7A8K855 629 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 NRP2O60462 931 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 ZBTB11O95625 1053 aaPredicted RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 SBK3P0C264 359 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 NPPBP16860 134 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 ALDH18A1P54886 795 aaKnown RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 SH3BP2P78314 561 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms