RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MCATQ8IVS2 390 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 RAB42Q8N4Z0 105 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 ENDOVQ8N8Q3 282 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 OR2L3Q8NG85 312 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 N4BP2L2Q92802 583 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CFAP36Q96G28 342 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 ZNF285Q96NJ3 590 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 GBP5Q96PP8 586 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 MIPEPQ99797 713 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 DPH2Q9BQC3 489 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 NLNQ9BYT8 704 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 FAM114A2Q9NRY5 505 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 INTS7Q9NVH2 962 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 PCSK5Q92824 1860 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 FAM187AA6NFU0 413 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 B8ZZF3 427 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 EIF3FO00303 357 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ZSCAN9O15535 394 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 RAD51CO43502 376 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 NRP2O60462 931 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 CTSVO60911 334 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 VPS26AO75436 327 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 SFTPCP11686 197 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 CDKN2DP55273 166 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 NFKB2Q00653 900 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 KCNAB2Q13303 367 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ARHGAP19Q14CB8 494 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 TLDC1Q6P9B6 456 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ANKMY2Q8IV38 441 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 LRRC56Q8IYG6 542 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ZNF655Q8N720 491 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ADAMTS17Q8TE56 1095 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 APOBEC4Q8WW27 367 aaKnown RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 DLG3Q92796 817 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 ERP44Q9BS26 406 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 MED13Q9UHV7 2174 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 TUBD1Q9UJT1 453 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 POLHQ9Y253 713 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 MDC1Q14676 2089 aaKnown RBP18.19■□□□□ 0.5
CKS1B-203ENST00000368439 BAHCC1Q9P281 2608 aa18.19■□□□□ 0.5
CKS1B-203ENST00000368439 SLC16A8O95907 504 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 MCM3P25205 808 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SKIV2L2P42285 1042 aaKnown RBP18.18■□□□□ 0.5
CKS1B-203ENST00000368439 PNLIPRP1P54315 467 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 PDIA2Q13087 525 aaKnown RBP18.18■□□□□ 0.5
CKS1B-203ENST00000368439 FAM69BQ5VUD6 431 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SUSD1Q6UWL2 747 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 FBXO36Q8NEA4 188 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 GABPB2Q8TAK5 448 aaPredicted RBP18.18■□□□□ 0.5
CKS1B-203ENST00000368439 ZNF480Q8WV37 535 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SMPDL3AQ92484 453 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SEC14L1Q92503 715 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SLC7A5P2Q9GIP4 190 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SLC25A18Q9H1K4 315 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 SLC6A20Q9NP91 592 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 MOCS1Q9NZB8 636 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 DHCR7Q9UBM7 475 aaKnown RBP18.18■□□□□ 0.5
CKS1B-203ENST00000368439 TCFL5Q9UL49 500 aa18.18■□□□□ 0.5
CKS1B-203ENST00000368439 GCN1Q92616 2671 aaKnown RBP18.18■□□□□ 0.5
CKS1B-203ENST00000368439 HELZ2Q9BYK8 2649 aaKnown RBP18.17■□□□□ 0.5
CKS1B-203ENST00000368439 IGKV1-8A0A0C4DH67 115 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 OR2A25A4D2G3 310 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 E7ENX8 843 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 HSD17B2P37059 387 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 TAP2Q03519 686 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 NFATC3Q12968 1075 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 NCF4Q15080 339 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 ZC3H12BQ5HYM0 836 aaKnown RBP18.17■□□□□ 0.5
CKS1B-203ENST00000368439 C1orf189Q5VU69 101 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 DUPD1Q68J44 220 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 PAQR3Q6TCH7 311 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 ZNF572Q7Z3I7 529 aaPredicted RBP18.17■□□□□ 0.5
CKS1B-203ENST00000368439 PPFIBP2Q8ND30 876 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 PROKR1Q8TCW9 393 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 EEF1AKMT1Q8WVE0 214 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 TAS2R13Q9NYV9 303 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 GRHL1Q9NZI5 618 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 WHRNQ9P202 907 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 TRMT6Q9UJA5 497 aaKnown RBP18.17■□□□□ 0.5
CKS1B-203ENST00000368439 ADAMTS6Q9UKP5 1117 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 SRPK3Q9UPE1 567 aa18.17■□□□□ 0.5
CKS1B-203ENST00000368439 SPTA1P02549 2419 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 FITM1A5D6W6 292 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 ZBTB14O43829 449 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 KLF7O75840 302 aaPredicted RBP18.16■□□□□ 0.5
CKS1B-203ENST00000368439 TSPAN12O95859 305 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 PLA2G2AP14555 144 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 ITGAXP20702 1163 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 AGXTP21549 392 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 PGGT1BP53609 377 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 FRMPD2BQ6IN97 320 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 FBXO42Q6P3S6 717 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 UBE2R2Q712K3 238 aaPredicted RBP18.16■□□□□ 0.5
CKS1B-203ENST00000368439 RNF44Q7L0R7 432 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 MAATS1Q7Z4T9 603 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 ZNF605Q86T29 641 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 APLFQ8IW19 511 aaPredicted RBP18.16■□□□□ 0.5
CKS1B-203ENST00000368439 BBOF1Q8ND07 529 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms