RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SSTR1P30872 391 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 DLSTP36957 453 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 GRIA3P42263 894 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CDKN2DP55273 166 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ITGA1P56199 1179 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 IL2P60568 153 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 SLC7A5Q01650 507 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FASTKQ14296 549 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 TRADDQ15628 312 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 ZC3H12BQ5HYM0 836 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 RBM20Q5T481 1227 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 HECTD2Q5U5R9 776 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 PRAMEF17Q5VTA0 474 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FCRL6Q6DN72 434 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FAM45BPQ6NSW5 357 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 TLDC1Q6P9B6 456 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FAM199XQ6PEV8 388 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 ZNF517Q6ZMY9 492 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 UBE2R2Q712K3 238 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 STRA8Q7Z7C7 330 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MCATQ8IVS2 390 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 FAM20CQ8IXL6 584 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CPNE9Q8IYJ1 553 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MMGT1Q8N4V1 131 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MNS1Q8NEH6 495 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 KIF18AQ8NI77 898 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FAM45AQ8TCE6 357 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FBXO25Q8TCJ0 367 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MCOLN3Q8TDD5 553 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ZNF480Q8WV37 535 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 SMPDL3AQ92484 453 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 SEC14L1Q92503 715 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 TTC9Q92623 222 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CDKL2Q92772 493 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CLIP3Q96DZ5 547 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 RNF31Q96EP0 1072 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 PDLIM5Q96HC4 596 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 CCDC138Q96M89 665 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CATSPER2Q96P56 530 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 GPR87Q9BY21 358 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 SLC7A5P2Q9GIP4 190 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 IL17BQ9UHF5 180 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 FARSAQ9Y285 508 aaKnown RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 PCDHGA6Q9Y5G7 932 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 KLK4Q9Y5K2 254 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 AP1M2Q9Y6Q5 423 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 KRT87PA6NCN2 255 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 E7ENX8 843 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 TERTO14746 1132 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 NKX2-8O15522 239 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 HCRTR1O43613 425 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 SRPX2O60687 465 aaPredicted RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 KATNA1O75449 491 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 OR2B3O76000 313 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 SLC16A8O95907 504 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 SYF2O95926 243 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 C8GP07360 202 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 HIST1H2AGP0C0S8 130 aaPredicted RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 HIST1H2ADP20671 130 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 CMPK1P30085 196 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 MAGEA4P43358 317 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PNLIPRP1P54315 467 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 RPS15P62841 145 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 CYP4F2P78329 520 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 TAP2Q03519 686 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PRDX1Q06830 199 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 GLE1Q53GS7 698 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 TAF1BQ53T94 588 aaPredicted RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 C8orf74Q6P047 294 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 FBXO42Q6P3S6 717 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PCSK4Q6UW60 755 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 SUSD1Q6UWL2 747 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 ZDHHC24Q6UX98 284 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PIWIL4Q7Z3Z4 852 aaKnown RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 TAX1BP1Q86VP1 789 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 DSELQ8IZU8 1212 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 MYO1HQ8N1T3 1032 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 GPATCH11Q8N954 259 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 OR2L3Q8NG85 312 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 DLG3Q92796 817 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 MR1Q95460 341 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 HIST1H2AHQ96KK5 128 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 HIST1H2AJQ99878 128 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 DPH2Q9BQC3 489 aaPredicted RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 H2AFJQ9BTM1 129 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 ACTR5Q9H9F9 607 aaPredicted RBP9.47□□□□□ -0.89
CD48-202ENST00000368046 PARVBQ9HBI1 364 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 ENAMQ9NRM1 1142 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PCMTD2Q9NV79 361 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 EURLQ9NYK6 297 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 SLC17A6Q9P2U8 582 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 CROTQ9UKG9 612 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PDE10AQ9Y233 779 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 KLHL20Q9Y2M5 609 aa9.47□□□□□ -0.89
CD48-202ENST00000368046 PSAT1Q9Y617 370 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms