RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 UGDHO60701 494 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 PARNO95453 639 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 CYP2A7P20853 494 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 PCMT1P22061 227 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 GKP32189 559 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 KIR3DL1P43629 444 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 C21orf58P58505 322 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 CDK5R2Q13319 367 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 KCNC3Q14003 757 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 FRG2Q64ET8 278 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 LRRC66Q68CR7 880 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 OR2T5Q6IEZ7 315 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 DUS1LQ6P1R4 473 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 CRTC3Q6UUV7 619 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 OR2T29Q8NH02 315 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 CHPT1Q8WUD6 406 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 STARD8Q92502 1023 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 METTL2AQ96IZ6 378 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 TSSK3Q96PN8 268 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 FRG2BQ96QU4 278 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 CSF3RQ99062 836 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 FUNDC2Q9BWH2 189 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 SPATA9Q9BWV2 254 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 CPEB1Q9BZB8 566 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 ZNF334Q9HCZ1 680 aaPredicted RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 IL1RAPQ9NPH3 570 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 THG1LQ9NWX6 298 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 IRAK4Q9NWZ3 460 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 WARS2Q9UGM6 360 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 ABT1Q9ULW3 272 aaKnown RBP13.9□□□□□ -0.18
CD48-201ENST00000368045 TPRKBQ9Y3C4 175 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 INSL5Q9Y5Q6 135 aa13.9□□□□□ -0.18
CD48-201ENST00000368045 SCN8AQ9UQD0 1980 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 ZNF99A8MXY4 864 aaPredicted RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 GFYI3L273 518 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 SCAMP3O14828 347 aaKnown RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 MAGEB3O15480 346 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 HNRNPCP07910 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
CD48-201ENST00000368045 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 JUPP14923 745 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 FPR1P21462 350 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 PTCHD3Q3KNS1 767 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 ATP13A5Q4VNC0 1218 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 CAPN13Q6MZZ7 669 aaPredicted RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 DOK6Q6PKX4 331 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 SLC16A12Q6ZSM3 486 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 CPA6Q8N4T0 437 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 MCOLN3Q8TDD5 553 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 FRS2Q8WU20 508 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 AASDHPPTQ9NRN7 309 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 FAM120CQ9NX05 1096 aaKnown RBP13.89□□□□□ -0.19
CD48-201ENST00000368045 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 MAPRE3Q9UPY8 281 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
CD48-201ENST00000368045 SOBPA7XYQ1 873 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 FOXD2O60548 495 aaPredicted RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 DPM1O60762 260 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 NDUFS2O75306 463 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 BCAS1O75363 584 aaPredicted RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 SEMG1P04279 462 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 INHAP05111 366 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 GSNP06396 782 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 PFKLP17858 780 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 AGXTP21549 392 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 PRKACGP22612 351 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 TACR1P25103 407 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 CDKN2CP42773 168 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 GP2P55259 537 aaKnown RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 SLC7A9P82251 487 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZXDBP98169 803 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 VMACQ2NL98 169 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 LIPJQ5W064 366 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 KDM4DQ6B0I6 523 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 DCDC5Q6ZRR9 648 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 SGCDQ92629 289 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 FBXL8Q96CD0 374 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 EMILIN2Q9BXX0 1053 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CHCHD3Q9NX63 227 aaKnown RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 HS3ST2Q9Y278 367 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CFAP99D6REC4 459 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 SLC22A1O15245 554 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 AP2A2O94973 939 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 GABARAPO95166 117 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms